RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 CHORDC1Q9UHD1 332 aaPredicted RBP16.39■□□□□ 0.21
TCHP-208ENST00000549550 STARD13Q9Y3M8 1113 aa16.39■□□□□ 0.21
TCHP-208ENST00000549550 NDUFS2O75306 463 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 ADCY5O95622 1261 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
TCHP-208ENST00000549550 CST3P01034 146 aaPredicted RBP16.38■□□□□ 0.21
TCHP-208ENST00000549550 LRRC63Q05C16 580 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 WDR72Q3MJ13 1102 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 SYCP2LQ5T4T6 812 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 GRAMD4Q6IC98 578 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 SDE2Q6IQ49 451 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 CCNI2Q6ZMN8 369 aaPredicted RBP16.38■□□□□ 0.21
TCHP-208ENST00000549550 STXBP4Q6ZWJ1 553 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 B3GALNT2Q8NCR0 500 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 SCAMP5Q8TAC9 235 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 ZNF419Q96HQ0 510 aaPredicted RBP16.38■□□□□ 0.21
TCHP-208ENST00000549550 KCNK16Q96T55 309 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 DUSP9Q99956 384 aaKnown RBP16.38■□□□□ 0.21
TCHP-208ENST00000549550 SLC6A17Q9H1V8 727 aa16.38■□□□□ 0.21
TCHP-208ENST00000549550 DNAJC17Q9NVM6 304 aaKnown RBP16.38■□□□□ 0.21
TCHP-208ENST00000549550 A8MXQ7 604 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 DLATP10515 647 aaKnown RBP16.37■□□□□ 0.21
TCHP-208ENST00000549550 GNSP15586 552 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 CASP1P29466 404 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 PRCPP42785 496 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 TUBP50607 506 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 TNNC1P63316 161 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 GRIK2Q13002 908 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 FAM26FQ5R3K3 315 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 SNX30Q5VWJ9 437 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 ISM2Q6H9L7 571 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 GLIS3Q8NEA6 775 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 ANKRD20A12PQ8NF67 263 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 MDM1Q8TC05 714 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 TRIM5Q9C035 493 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 HSPBP1Q9NZL4 362 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 SUSD2Q9UGT4 822 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 NFE2L3Q9Y4A8 694 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 RAD54BQ9Y620 910 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 UBE4BO95155 1302 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 TMEM131Q92545 1883 aa16.37■□□□□ 0.21
TCHP-208ENST00000549550 NEDD8-MDP1E9PL57 170 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 FAM163BP0C2L3 166 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 ZNF18P17022 549 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 TNNI1P19237 187 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 MAOBP27338 520 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 SLC5A3P53794 718 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 TPD52L1Q16890 204 aaPredicted RBP16.36■□□□□ 0.21
TCHP-208ENST00000549550 FAM114A1Q8IWE2 563 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 NELFBQ8WX92 580 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 FOXJ1Q92949 421 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 MRGPRX1Q96LB2 322 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 GABRG3Q99928 467 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 NACA2Q9H009 215 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 THAP9Q9H5L6 903 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 GMIPQ9P107 970 aa16.36■□□□□ 0.21
TCHP-208ENST00000549550 APOBEC2Q9Y235 224 aaKnown RBP16.36■□□□□ 0.21
TCHP-208ENST00000549550 PRRT4C9JH25 899 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 CACNG3O60359 315 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 TYRP14679 529 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 CD44P16070 742 aaKnown RBP16.35■□□□□ 0.21
TCHP-208ENST00000549550 ZNF75DP51815 510 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 SNRNP35Q16560 246 aaKnown RBP16.35■□□□□ 0.21
TCHP-208ENST00000549550 WDR45BQ5MNZ6 344 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 CDKAL1Q5VV42 579 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 KIAA1324Q6UXG2 1013 aaKnown RBP16.35■□□□□ 0.21
TCHP-208ENST00000549550 TOGARAM2Q6ZUX3 1019 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 SLCO6A1Q86UG4 719 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 FAM35AQ86V20 835 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 RDH13Q8NBN7 331 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 SCFD1Q8WVM8 642 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 HPS3Q969F9 1004 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 TRIM44Q96DX7 344 aaPredicted RBP16.35■□□□□ 0.21
TCHP-208ENST00000549550 XPO6Q96QU8 1125 aaKnown RBP16.35■□□□□ 0.21
TCHP-208ENST00000549550 BBS2Q9BXC9 721 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 ZDHHC5Q9C0B5 715 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 KIAA1586Q9HCI6 787 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 CACNA2D2Q9NY47 1150 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 IL37Q9NZH6 218 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 NXF1Q9UBU9 619 aaKnown RBP16.35■□□□□ 0.21
TCHP-208ENST00000549550 ATP8B3O60423 1300 aa16.35■□□□□ 0.21
TCHP-208ENST00000549550 GOLGA4Q13439 2230 aaKnown RBP16.34■□□□□ 0.21
TCHP-208ENST00000549550 EIF3DO15371 548 aaKnown RBP eCLIP16.34■□□□□ 0.21
TCHP-208ENST00000549550 CBFA2T3O75081 653 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 ZDHHC11BP0C7U3 371 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 EEF1GP26641 437 aaKnown RBP16.34■□□□□ 0.21
TCHP-208ENST00000549550 HOXD13P35453 343 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 STK4Q13043 487 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 TPGS1Q6ZTW0 290 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 PAQR9Q6ZVX9 377 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 HTR3DQ70Z44 454 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 GLRX5Q86SX6 157 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 HNRNPLLQ8WVV9 542 aaKnown RBP16.34■□□□□ 0.21
TCHP-208ENST00000549550 CCDC127Q96BQ5 260 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 CGRRF1Q99675 332 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 TSG101Q99816 390 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 MED10Q9BTT4 135 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 DMAP1Q9NPF5 467 aaPredicted RBP16.34■□□□□ 0.21
TCHP-208ENST00000549550 FANCLQ9NW38 375 aa16.34■□□□□ 0.21
TCHP-208ENST00000549550 PCOLCE2Q9UKZ9 415 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms