RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 PTPN9P43378 593 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 USP4Q13107 963 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 NNTQ13423 1086 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 HTR4Q13639 388 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 SLC25A52Q3SY17 297 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 DCUN1D2Q6PH85 259 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 PARM1Q6UWI2 310 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 MTSS1LQ765P7 747 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 BNIPLQ7Z465 357 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 MIB1Q86YT6 1006 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 CELF5Q8N6W0 485 aaKnown RBP22■■□□□ 1.11
CACNB3-210ENST00000548874 ACRBPQ8NEB7 543 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 RIN3Q8TB24 985 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 RXFP2Q8WXD0 754 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 E2F7Q96AV8 911 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 SERPINB11Q96P15 392 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 LUC7LQ9NQ29 371 aaKnown RBP22■■□□□ 1.11
CACNB3-210ENST00000548874 SMPD4Q9NXE4 827 aa22■■□□□ 1.11
CACNB3-210ENST00000548874 HBS1LQ9Y450 684 aaKnown RBP22■■□□□ 1.11
CACNB3-210ENST00000548874 IRAK2O43187 625 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 NRDCO43847 1150 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 ECI2O75521 394 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 PDGFRAP16234 1089 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 GPD1P21695 349 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 COG7P83436 770 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 TCEAL1Q15170 157 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 TRIP4Q15650 581 aaPredicted RBP21.99■■□□□ 1.11
CACNB3-210ENST00000548874 ZNF77Q15935 545 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 TANGO2Q6ICL3 276 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 DDX42Q86XP3 938 aaKnown RBP eCLIP21.99■■□□□ 1.11
CACNB3-210ENST00000548874 SH3RF2Q8TEC5 729 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 FNIP1Q8TF40 1166 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 FGF14Q92915 247 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 ELSPBP1Q96BH3 223 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 PGAP3Q96FM1 320 aaPredicted RBP21.99■■□□□ 1.11
CACNB3-210ENST00000548874 CFAP57Q96MR6 1250 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 LRRC3BQ96PB8 259 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 NUP85Q9BW27 656 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 KCNF1Q9H3M0 494 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 ZFP14Q9HCL3 533 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 GKN1Q9NS71 199 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 UVRAGQ9P2Y5 699 aa21.99■■□□□ 1.11
CACNB3-210ENST00000548874 SLC12A8A0AV02 714 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 C19orf67A6NJJ6 358 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 LEFTY2O00292 366 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 MSI1O43347 362 aaKnown RBP21.98■■□□□ 1.11
CACNB3-210ENST00000548874 IGLV3-27P01718 113 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 TFE3P19532 575 aaPredicted RBP21.98■■□□□ 1.11
CACNB3-210ENST00000548874 SDC4P31431 198 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 ZNF143P52747 638 aaPredicted RBP21.98■■□□□ 1.11
CACNB3-210ENST00000548874 KRT83P78385 493 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 OGDHQ02218 1023 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 CCDC14Q49A88 953 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 ADAM32Q8TC27 787 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 SLC39A13Q96H72 371 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 TBCBQ99426 244 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 DESI2Q9BSY9 194 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 TRIM7Q9C029 511 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 CALCOCO1Q9P1Z2 691 aa21.98■■□□□ 1.11
CACNB3-210ENST00000548874 C5orf42Q9H799 3197 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 RCCD1A6NED2 376 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 HEPACAM2A8MVW5 462 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 M0QYT0 321 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 GREM1O60565 184 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 STC2O76061 302 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 ENDOD1O94919 500 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 SULT1E1P49888 294 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 KPNA1P52294 538 aaPredicted RBP21.97■■□□□ 1.11
CACNB3-210ENST00000548874 VAV2P52735 878 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 RING1Q06587 406 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 ZNF252P-AS1Q0IIN9 211 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 KIAA1958Q8N8K9 716 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 ST13P5Q8NFI4 369 aaPredicted RBP21.97■■□□□ 1.11
CACNB3-210ENST00000548874 RFFLQ8WZ73 363 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 CENPIQ92674 756 aaPredicted RBP21.97■■□□□ 1.11
CACNB3-210ENST00000548874 WBP2Q969T9 261 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 NXPE3Q969Y0 559 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 PLD4Q96BZ4 506 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 KXD1Q9BQD3 176 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 FAM204AQ9H8W3 233 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 DDIT4Q9NX09 232 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 CTTNBP2NLQ9P2B4 639 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 CFAP97Q9P2B7 532 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 LIMD1Q9UGP4 676 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 TLR6Q9Y2C9 796 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 ADGRG1Q9Y653 693 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 NUMBLQ9Y6R0 609 aa21.97■■□□□ 1.11
CACNB3-210ENST00000548874 PJA2O43164 708 aa21.96■■□□□ 1.11
CACNB3-210ENST00000548874 MTA2O94776 668 aa21.96■■□□□ 1.11
CACNB3-210ENST00000548874 TBX4P57082 545 aa21.96■■□□□ 1.11
CACNB3-210ENST00000548874 C15orf59Q2T9L4 293 aaPredicted RBP21.96■■□□□ 1.11
CACNB3-210ENST00000548874 VITQ6UXI7 678 aa21.96■■□□□ 1.11
CACNB3-210ENST00000548874 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.96■■□□□ 1.11
CACNB3-210ENST00000548874 RHOT2Q8IXI1 618 aa21.96■■□□□ 1.11
CACNB3-210ENST00000548874 ZNF564Q8TBZ8 553 aaPredicted RBP21.96■■□□□ 1.11
CACNB3-210ENST00000548874 BPIFB1Q8TDL5 484 aa21.96■■□□□ 1.11
CACNB3-210ENST00000548874 FCRL2Q96LA5 508 aaPredicted RBP21.96■■□□□ 1.11
CACNB3-210ENST00000548874 CNPY3Q9BT09 278 aa21.96■■□□□ 1.11
CACNB3-210ENST00000548874 RPP25Q9BUL9 199 aaKnown RBP21.96■■□□□ 1.11
CACNB3-210ENST00000548874 PLA2G2FQ9BZM2 168 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms