RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 TFAP2BQ92481 460 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 MYRFLQ96LU7 910 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 SLITRK1Q96PX8 696 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 EDEM3Q9BZQ6 932 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 XPO4Q9C0E2 1151 aaKnown RBP14.08□□□□□ -0.16
RAB5B-203ENST00000546810 RBSNQ9H1K0 784 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 PDCL3Q9H2J4 239 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 ATXN3LQ9H3M9 355 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 FBXO44Q9H4M3 255 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 THG1LQ9NWX6 298 aaKnown RBP14.08□□□□□ -0.16
RAB5B-203ENST00000546810 EBF1Q9UH73 591 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 ZMYM5Q9UJ78 669 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 MYO6Q9UM54 1294 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 CEP83Q9Y592 693 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.08□□□□□ -0.16
RAB5B-203ENST00000546810 NBEAQ8NFP9 2946 aa14.08□□□□□ -0.16
RAB5B-203ENST00000546810 SPAARA0A1B0GVQ0 90 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 TRDMT1O14717 391 aaKnown RBP14.07□□□□□ -0.16
RAB5B-203ENST00000546810 XPO1O14980 1071 aaKnown RBP14.07□□□□□ -0.16
RAB5B-203ENST00000546810 EPHB6O15197 1021 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 BEST1O76090 585 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 PRAMEF12O95522 483 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 EGFP01133 1207 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 HMGA1P17096 107 aaKnown RBP14.07□□□□□ -0.16
RAB5B-203ENST00000546810 YWHAQP27348 245 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 SLC5A3P53794 718 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 IRX4P78413 519 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 IFRD2Q12894 506 aaPredicted RBP14.07□□□□□ -0.16
RAB5B-203ENST00000546810 FIGNQ5HY92 759 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 PMS2CLQ68D20 193 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 SARM1Q6SZW1 724 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 GAREM2Q75VX8 874 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 CYP2U1Q7Z449 544 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 C11orf74Q86VG3 221 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 TTC30AQ86WT1 665 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 PDZD8Q8NEN9 1154 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 ZMIZ2Q8NF64 920 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 UBA3Q8TBC4 463 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 FBXO32Q969P5 355 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 TTLL2Q9BWV7 592 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 LRRC4Q9HBW1 653 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 INVSQ9Y283 1065 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 EML5Q05BV3 1969 aa14.07□□□□□ -0.16
RAB5B-203ENST00000546810 GFPT2O94808 682 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 TPM1P09493 284 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 PNMA6AP0CW24 399 aaPredicted RBP14.06□□□□□ -0.16
RAB5B-203ENST00000546810 CYP11B1P15538 503 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 FERP16591 822 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 DDX6P26196 483 aaKnown RBP eCLIP14.06□□□□□ -0.16
RAB5B-203ENST00000546810 WEE1P30291 646 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 CLCN1P35523 988 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 PBX1P40424 430 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 DGKEP52429 567 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 JAM2P57087 298 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 SIM1P81133 766 aaPredicted RBP14.06□□□□□ -0.16
RAB5B-203ENST00000546810 PDE4CQ08493 712 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 RUNX3Q13761 415 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 COL28A1Q2UY09 1125 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 SYT13Q7L8C5 426 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 SLC47A2Q86VL8 602 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 GAS2L3Q86XJ1 694 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 ZNF677Q86XU0 584 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 OVCA2Q8WZ82 227 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 MRPS31Q92665 395 aaKnown RBP14.06□□□□□ -0.16
RAB5B-203ENST00000546810 CHFRQ96EP1 664 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 NOX5Q96PH1 765 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 TRIM5Q9C035 493 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 NUCKS1Q9H1E3 243 aaKnown RBP14.06□□□□□ -0.16
RAB5B-203ENST00000546810 GKN1Q9NS71 199 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 TMEM30AQ9NV96 361 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 TRPM5Q9NZQ8 1165 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 PCDHGC3Q9UN70 934 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 ITIH6Q6UXX5 1313 aa14.06□□□□□ -0.16
RAB5B-203ENST00000546810 ADAMTS20P59510 1910 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 FLNBO75369 2602 aaKnown RBP14.05□□□□□ -0.16
RAB5B-203ENST00000546810 ITPR1Q14643 2758 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 A0A1W2PQJ5 194 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 FAM221BA6H8Z2 402 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 H0Y626 953 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 TNFRSF10BO14763 440 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 TRIM16O95361 564 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 F11P03951 625 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 CAPNS1P04632 268 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 DRD1P21728 446 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 RDXP35241 583 aaKnown RBP14.05□□□□□ -0.16
RAB5B-203ENST00000546810 PLA2G4AP47712 749 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 SNX16P57768 344 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 AMPD2Q01433 879 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 LMAN2Q12907 356 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 TRIM14Q14142 442 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 DMC1Q14565 340 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 FBXO43Q4G163 708 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 PKDCCQ504Y2 493 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 USP39Q53GS9 565 aaKnown RBP14.05□□□□□ -0.16
RAB5B-203ENST00000546810 SPECC1LQ69YQ0 1117 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 PIGZQ86VD9 579 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 STKLD1Q8NE28 680 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 RPLP0P6Q8NHW5 317 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 KCTD13Q8WZ19 329 aa14.05□□□□□ -0.16
RAB5B-203ENST00000546810 FAM83CQ9BQN1 747 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms