RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 HPCAP84074 193 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 NTRK3Q16288 839 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 CTXN3Q4LDR2 81 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 LRRC34Q8IZ02 419 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 VCPIP1Q96JH7 1222 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 FAM111AQ96PZ2 611 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 PNKPQ96T60 521 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 TBC1D23Q9NUY8 699 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 WWOXQ9NZC7 414 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 SOX13Q9UN79 622 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.72□□□□□ -0.69
SSH1-203ENST00000546433 MAGEB16A2A368 324 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 FOSL2P15408 326 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 PSMA4P25789 261 aaKnown RBP10.72□□□□□ -0.69
SSH1-203ENST00000546433 TRPC1P48995 793 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 CASP7P55210 303 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 CDH18Q13634 790 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 LY6KQ17RY6 165 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 ATAT1Q5SQI0 421 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 FBXW10Q5XX13 1052 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 DENND1BQ6P3S1 775 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 DENND5BQ6ZUT9 1274 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 SLC26A11Q86WA9 606 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 REPS2Q8NFH8 660 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 TMEM176AQ96HP8 235 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 PDCD2LQ9BRP1 358 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 FUT8Q9BYC5 575 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 SYNDIG1Q9H7V2 258 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 H2AFY2Q9P0M6 372 aaPredicted RBP10.72□□□□□ -0.69
SSH1-203ENST00000546433 PDP2Q9P2J9 529 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 ADGRA2Q96PE1 1338 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 THP07101 528 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 RBP1P09455 135 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 H2AFXP16104 143 aaPredicted RBP10.72□□□□□ -0.69
SSH1-203ENST00000546433 OTUD4Q01804 1114 aaKnown RBP10.72□□□□□ -0.69
SSH1-203ENST00000546433 BST2Q10589 180 aaKnown RBP10.72□□□□□ -0.69
SSH1-203ENST00000546433 PRAMEF19Q5SWL8 479 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 NT5DC1Q5TFE4 455 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 FAM172AQ8WUF8 416 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 TADA1Q96BN2 335 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 ABHD8Q96I13 439 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 CBWD1Q9BRT8 395 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 BRD8Q9H0E9 1235 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 RMND5AQ9H871 391 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 CAPN6Q9Y6Q1 641 aa10.72□□□□□ -0.69
SSH1-203ENST00000546433 CAND2O75155 1236 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 LGALS2P05162 132 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 SERPIND1P05546 499 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 SMIM10L2AP0DMW4 78 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 SMIM10L2BP0DMW5 78 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 SEC24CP53992 1094 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 RUNX1T1Q06455 604 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 DNAJC3Q13217 504 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 TP53BP2Q13625 1128 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 TMEM154Q6P9G4 183 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.71□□□□□ -0.69
SSH1-203ENST00000546433 SPIRE2Q8WWL2 714 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 ARNTL2Q8WYA1 636 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 TBCBQ99426 244 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 FUCA2Q9BTY2 467 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 GANQ9H2C0 597 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 ZNF229Q9UJW7 825 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 SALL3Q9BXA9 1300 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 SYNDIG1LA6NDD5 238 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 CYB561D2O14569 222 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 SYNCRIPO60506 623 aaKnown RBP10.71□□□□□ -0.69
SSH1-203ENST00000546433 PTPN7P35236 360 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 KAZALD1Q96I82 304 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 APOL5Q9BWW9 433 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 EFCAB1Q9HAE3 211 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 PCDH9Q9HC56 1237 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 ABI2Q9NYB9 513 aaPredicted RBP10.71□□□□□ -0.69
SSH1-203ENST00000546433 USP18Q9UMW8 372 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.71□□□□□ -0.69
SSH1-203ENST00000546433 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.71□□□□□ -0.69
SSH1-203ENST00000546433 CKBP12277 381 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 DUSP28Q4G0W2 176 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 PHF21AQ96BD5 680 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 CNDP1Q96KN2 507 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 RPRD1AQ96P16 312 aaPredicted RBP10.71□□□□□ -0.69
SSH1-203ENST00000546433 SYTL2Q9HCH5 934 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 A1CFQ9NQ94 594 aaKnown RBP10.71□□□□□ -0.69
SSH1-203ENST00000546433 TBC1D13Q9NVG8 400 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 IL1RAPL1Q9NZN1 696 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 RNF112Q9ULX5 631 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 AP4E1Q9UPM8 1137 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 Q9Y3F1 56 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 RAD54BQ9Y620 910 aa10.71□□□□□ -0.69
SSH1-203ENST00000546433 TCRBV5S4A2TA0A5A2 114 aa10.71□□□□□ -0.7
SSH1-203ENST00000546433 E7ENQ6 273 aa10.71□□□□□ -0.7
SSH1-203ENST00000546433 CRTAMO95727 393 aa10.71□□□□□ -0.7
SSH1-203ENST00000546433 CASP4P49662 377 aa10.71□□□□□ -0.7
SSH1-203ENST00000546433 PTENP60484 403 aa10.71□□□□□ -0.7
SSH1-203ENST00000546433 KPNB1Q14974 876 aaKnown RBP10.71□□□□□ -0.7
SSH1-203ENST00000546433 PKN1Q16512 942 aa10.71□□□□□ -0.7
SSH1-203ENST00000546433 ZNF571Q7Z3V5 609 aaPredicted RBP10.71□□□□□ -0.7
SSH1-203ENST00000546433 IFNEQ86WN2 208 aa10.71□□□□□ -0.7
SSH1-203ENST00000546433 NT5DC4Q86YG4 428 aa10.71□□□□□ -0.7
SSH1-203ENST00000546433 MYCBPAPQ8TBZ2 947 aa10.71□□□□□ -0.7
SSH1-203ENST00000546433 EPS8L3Q8TE67 593 aaKnown RBP10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms