RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 PIWIL1Q96J94 861 aaKnown RBP17.56■□□□□ 0.4
LTBR-215ENST00000546296 C11orf70Q9BRQ4 267 aa17.56■□□□□ 0.4
LTBR-215ENST00000546296 C11orf16Q9NQ32 467 aa17.56■□□□□ 0.4
LTBR-215ENST00000546296 ADAM22Q9P0K1 906 aa17.56■□□□□ 0.4
LTBR-215ENST00000546296 ZNF510Q9Y2H8 683 aa17.56■□□□□ 0.4
LTBR-215ENST00000546296 MRPS17Q9Y2R5 130 aaKnown RBP17.56■□□□□ 0.4
LTBR-215ENST00000546296 BZW2Q9Y6E2 419 aaKnown RBP17.56■□□□□ 0.4
LTBR-215ENST00000546296 MUC3AQ02505 3323 aa17.56■□□□□ 0.4
LTBR-215ENST00000546296 SPECC1L-ADORA2AF8WAN1 911 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 MSI1O43347 362 aaKnown RBP17.55■□□□□ 0.4
LTBR-215ENST00000546296 SERPING1P05155 500 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 CD72P21854 359 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 CORO1AP31146 461 aaKnown RBP17.55■□□□□ 0.4
LTBR-215ENST00000546296 HARS2P49590 506 aaKnown RBP17.55■□□□□ 0.4
LTBR-215ENST00000546296 MLLT6P55198 1093 aaPredicted RBP17.55■□□□□ 0.4
LTBR-215ENST00000546296 TBX4P57082 545 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 CENPCQ03188 943 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 UBXN2BQ14CS0 331 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 TRIP4Q15650 581 aaPredicted RBP17.55■□□□□ 0.4
LTBR-215ENST00000546296 TDRD12Q587J7 1177 aaKnown RBP17.55■□□□□ 0.4
LTBR-215ENST00000546296 ACAD10Q6JQN1 1059 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 SLC26A9Q7LBE3 791 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 ZNF571Q7Z3V5 609 aaPredicted RBP17.55■□□□□ 0.4
LTBR-215ENST00000546296 TMC6Q7Z403 805 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 PHLDB2Q86SQ0 1253 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 RALGPS2Q86X27 583 aaPredicted RBP17.55■□□□□ 0.4
LTBR-215ENST00000546296 FBXL6Q8N531 539 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 ADAM32Q8TC27 787 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 FAM3CQ92520 227 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 MSANTD3Q96H12 275 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 SERPINB11Q96P15 392 aa17.55■□□□□ 0.4
LTBR-215ENST00000546296 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.55■□□□□ 0.4
LTBR-215ENST00000546296 KANSL1LA0AUZ9 987 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 OTOL1A6NHN0 477 aaPredicted RBP17.54■□□□□ 0.4
LTBR-215ENST00000546296 TMCO5BA8MYB1 307 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 GREM1O60565 184 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 ADH1CP00326 375 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 CALB1P05937 261 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 GBP1P32455 592 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 DHCR24Q15392 516 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 PPP1R2P3Q6NXS1 205 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 C1orf228Q6PIY5 440 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 TAC4Q86UU9 113 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 VPS36Q86VN1 386 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 PHF13Q86YI8 300 aaPredicted RBP17.54■□□□□ 0.4
LTBR-215ENST00000546296 DENND1CQ8IV53 801 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 OR8K1Q8NGG5 319 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 EXOC4Q96A65 974 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 SLC2A13Q96QE2 648 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 NELL2Q99435 816 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 LRFN3Q9BTN0 628 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 FOXQ1Q9C009 403 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 FAM204AQ9H8W3 233 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 ZNHIT6Q9NWK9 470 aaKnown RBP17.54■□□□□ 0.4
LTBR-215ENST00000546296 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.54■□□□□ 0.4
LTBR-215ENST00000546296 WDR35Q9P2L0 1181 aa17.54■□□□□ 0.4
LTBR-215ENST00000546296 AGO1Q9UL18 857 aaKnown RBP17.54■□□□□ 0.4
LTBR-215ENST00000546296 SYNJ2BP-COX16A0A087WUM0 186 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 FAM170BA6NMN3 283 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 DAB1O75553 588 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 KLKB1P03952 638 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 CYP17A1P05093 508 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 CTHP32929 405 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 GJA4P35212 333 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 NOS2P35228 1153 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 SCNN1AP37088 669 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 ZNF75DP51815 510 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 ANO4Q32M45 955 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 ASTLQ6HA08 431 aaPredicted RBP17.53■□□□□ 0.4
LTBR-215ENST00000546296 RHBDF2Q6PJF5 856 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 Q6ZNB5 142 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 UNC45BQ8IWX7 931 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 SYT11Q9BT88 431 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 COX16Q9P0S2 106 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 NDRG2Q9UN36 371 aaKnown RBP17.53■□□□□ 0.4
LTBR-215ENST00000546296 TLR6Q9Y2C9 796 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 SIT1Q9Y3P8 196 aa17.53■□□□□ 0.4
LTBR-215ENST00000546296 TRUB2O95900 331 aaKnown RBP17.52■□□□□ 0.4
LTBR-215ENST00000546296 ADH5P11766 374 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 MATKP42679 507 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 CLCN5P51795 746 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 C1QBPQ07021 282 aaKnown RBP17.52■□□□□ 0.4
LTBR-215ENST00000546296 LY6G5CQ5SRR4 150 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 NUGGCQ68CJ6 796 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 TMEM25Q86YD3 366 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 RNF34Q969K3 372 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 DDX23Q9BUQ8 820 aaKnown RBP17.52■□□□□ 0.4
LTBR-215ENST00000546296 LTB4R2Q9NPC1 389 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 SPHK2Q9NRA0 654 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 METTL5Q9NRN9 209 aaKnown RBP17.52■□□□□ 0.4
LTBR-215ENST00000546296 DDIT4Q9NX09 232 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 RRN3Q9NYV6 651 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 TAS2R14Q9NYV8 317 aa17.52■□□□□ 0.4
LTBR-215ENST00000546296 AKR1B15C9JRZ8 316 aaPredicted RBP17.51■□□□□ 0.39
LTBR-215ENST00000546296 DDX3XO00571 662 aaKnown RBP eCLIP17.51■□□□□ 0.392e-29■■■■■ 28.3
LTBR-215ENST00000546296 NCAM2O15394 837 aa17.51■□□□□ 0.39
LTBR-215ENST00000546296 TECTAO75443 2155 aa17.51■□□□□ 0.39
LTBR-215ENST00000546296 CHKAP35790 457 aa17.51■□□□□ 0.39
LTBR-215ENST00000546296 SLC11A2P49281 568 aa17.51■□□□□ 0.39
LTBR-215ENST00000546296 ADKP55263 362 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms