RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 CNMDO75829 334 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 LMNAP02545 664 aaKnown RBP16.36■□□□□ 0.21
LDLR-204ENST00000545707 P4HA1P13674 534 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 VHLP40337 213 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 OCRLQ01968 901 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 PDK2Q15119 407 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 TSNAXIP1Q2TAA8 658 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 SLC9A4Q6AI14 798 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 C7orf31Q8N865 590 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 RTP4Q96DX8 246 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 RILPQ96NA2 401 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 NRDE2Q9H7Z3 1164 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 BCLAF3A2AJT9 711 aaKnown RBP16.36■□□□□ 0.21
LDLR-204ENST00000545707 SPDYE5A6NIY4 337 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 KLF11O14901 512 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 HBP1O60381 514 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 LYPLA1O75608 230 aaPredicted RBP16.36■□□□□ 0.21
LDLR-204ENST00000545707 ATICP31939 592 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 PHKA2P46019 1235 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 UBAP2LQ14157 1087 aaKnown RBP16.36■□□□□ 0.21
LDLR-204ENST00000545707 NBPF20Q3BBV1 942 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 TEX44Q53QW1 395 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 ADGRF2Q8IZF7 708 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 SH3TC2Q8TF17 1288 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 KIF12Q96FN5 646 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 OTUD5Q96G74 571 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 ANKRD27Q96NW4 1050 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 PGLYRP2Q96PD5 576 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 CEP41Q9BYV8 373 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 IL1RAPL1Q9NZN1 696 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 SIRPGQ9P1W8 387 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 RPL26L1Q9UNX3 145 aaKnown RBP16.36■□□□□ 0.21
LDLR-204ENST00000545707 SNX9Q9Y5X1 595 aa16.36■□□□□ 0.21
LDLR-204ENST00000545707 CAPN14A8MX76 684 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 MCF2P10911 925 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 TGM2P21980 687 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 INCA1Q0VD86 236 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 LGSNQ5TDP6 509 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 KCNT2Q6UVM3 1135 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 LRRC74BQ6ZQY2 392 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 LMNTD2Q8IXW0 634 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 PYROXD2Q8N2H3 581 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 SMC1BQ8NDV3 1235 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 STMN2Q93045 179 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 EBNA1BP2Q99848 306 aaKnown RBP16.35■□□□□ 0.21
LDLR-204ENST00000545707 ELP3Q9H9T3 547 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 KCNK4Q9NYG8 393 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 ZNF180Q9UJW8 692 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 PPME1Q9Y570 386 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 E2F8A0AVK6 867 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 ENO4A6NNW6 628 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 PRR5-ARHGAP8B1AHC4 643 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 TRDMT1O14717 391 aaKnown RBP16.35■□□□□ 0.21
LDLR-204ENST00000545707 KRT38O76015 456 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 ACADSP16219 412 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 RBP5P82980 135 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 ARHGAP8P85298 464 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 SLC6A3Q01959 620 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 SLC34A1Q06495 639 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 BSPRYQ5W0U4 402 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 NAIF1Q69YI7 327 aaPredicted RBP16.35■□□□□ 0.21
LDLR-204ENST00000545707 CASC4Q6P4E1 433 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 TMEM154Q6P9G4 183 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 DENND5BQ6ZUT9 1274 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 SLC25A41Q8N5S1 370 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 DEPDC1BQ8WUY9 529 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 C7orf26Q96N11 449 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 ASB7Q9H672 318 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 VRTNQ9H8Y1 702 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 GINS2Q9Y248 185 aa16.35■□□□□ 0.21
LDLR-204ENST00000545707 WDR27A2RRH5 827 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 MEI4A8MW99 385 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 LIN7AO14910 233 aaPredicted RBP16.34■□□□□ 0.21
LDLR-204ENST00000545707 ITM2AO43736 263 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 L1CAMP32004 1257 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 CCNFP41002 786 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 ATG16L1Q676U5 607 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 EXOC8Q8IYI6 725 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 STKLD1Q8NE28 680 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 GSDMBQ8TAX9 411 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 PPP1R13LQ8WUF5 828 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 CLMNQ96JQ2 1002 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 THTPAQ9BU02 230 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 APOL6Q9BWW8 343 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 DPEP3Q9H4B8 488 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 FAM159BA6NKW6 160 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 BPGMP07738 259 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 F7P08709 466 aaPredicted RBP16.34■□□□□ 0.21
LDLR-204ENST00000545707 RPL10AP62906 217 aaKnown RBP16.34■□□□□ 0.21
LDLR-204ENST00000545707 MOB2Q70IA6 237 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 CRLF3Q8IUI8 442 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 KBTBD2Q8IY47 623 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 NLRP7Q8WX94 980 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 MAF1Q9H063 256 aa16.34■□□□□ 0.21
LDLR-204ENST00000545707 HBS1LQ9Y450 684 aaKnown RBP16.34■□□□□ 0.21
LDLR-204ENST00000545707 CCDC189A1A4V9 331 aa16.33■□□□□ 0.2
LDLR-204ENST00000545707 IL1BP01584 269 aa16.33■□□□□ 0.2
LDLR-204ENST00000545707 ZNF286BP0CG31 522 aa16.33■□□□□ 0.2
LDLR-204ENST00000545707 LCP1P13796 627 aa16.33■□□□□ 0.2
LDLR-204ENST00000545707 KCNA4P22459 653 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms