RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 IQCDQ96DY2 449 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 TM2D2Q9BX73 214 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 EBF3Q9H4W6 596 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 PNPLA8Q9NP80 782 aa5.57□□□□□ -1.52
SNHG1-224ENST00000545688 SPATA31A1Q5TZJ5 1347 aa5.56□□□□□ -1.52
SNHG1-224ENST00000545688 C16orf96A6NNT2 1141 aa5.56□□□□□ -1.52
SNHG1-224ENST00000545688 SNHG28P0DPA3 235 aa5.56□□□□□ -1.52
SNHG1-224ENST00000545688 ATICP31939 592 aa5.56□□□□□ -1.52
SNHG1-224ENST00000545688 PBX1P40424 430 aa5.56□□□□□ -1.52
SNHG1-224ENST00000545688 WDR5P61964 334 aaKnown RBP5.56□□□□□ -1.52
SNHG1-224ENST00000545688 RAE1P78406 368 aaKnown RBP5.56□□□□□ -1.52
SNHG1-224ENST00000545688 UBE2Q1Q7Z7E8 422 aa5.56□□□□□ -1.52
SNHG1-224ENST00000545688 WDR75Q8IWA0 830 aaKnown RBP5.56□□□□□ -1.52
SNHG1-224ENST00000545688 KRT78Q8N1N4 520 aa5.56□□□□□ -1.52
SNHG1-224ENST00000545688 WIPF2Q8TF74 440 aaPredicted RBP5.56□□□□□ -1.52
SNHG1-224ENST00000545688 MLXIPLQ9NP71 852 aa5.56□□□□□ -1.52
SNHG1-224ENST00000545688 ARL8BQ9NVJ2 186 aa5.56□□□□□ -1.52
SNHG1-224ENST00000545688 RHPN2P1A8MT19 583 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 THAP12O43422 761 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 IL18RAPO95256 599 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 PLAUP00749 431 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 ARP10275 920 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 CPA2P48052 419 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 STIM1Q13586 685 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 FAM110CQ1W6H9 321 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 LEXMQ3ZCV2 418 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 ABLIM2Q6H8Q1 611 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 KRT28Q7Z3Y7 464 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 TFAP2DQ7Z6R9 452 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 ANKRD13AQ8IZ07 590 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 SAMD14Q8IZD0 417 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-224ENST00000545688 NSMCE1Q8WV22 266 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 ZFYVE19Q96K21 471 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 FCRL5Q96RD9 977 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 SCNM1Q9BWG6 230 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 KRTAP1-5Q9BYS1 174 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 AGO4Q9HCK5 861 aaKnown RBP5.55□□□□□ -1.52
SNHG1-224ENST00000545688 VPS4AQ9UN37 437 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.55□□□□□ -1.52
SNHG1-224ENST00000545688 PCDHB2Q9Y5E7 798 aa5.55□□□□□ -1.52
SNHG1-224ENST00000545688 C2CD4BA6NLJ0 364 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 FOXN3O00409 490 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-224ENST00000545688 PQBP1O60828 265 aaKnown RBP5.54□□□□□ -1.52
SNHG1-224ENST00000545688 CBFA2T3O75081 653 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 SCP2P22307 547 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 PIK3CBP42338 1070 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 ME1P48163 572 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 GPS1Q13098 491 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 MTX1Q13505 466 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 KLHDC7AQ5VTJ3 777 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 CRTC1Q6UUV9 634 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 ZNF793Q6ZN11 406 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 ARFGAP1Q8N6T3 406 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 LRRC46Q96FV0 321 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 TRMT61AQ96FX7 289 aaKnown RBP5.54□□□□□ -1.52
SNHG1-224ENST00000545688 ABHD10Q9NUJ1 306 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 POT1Q9NUX5 634 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 HS3ST3B1Q9Y662 390 aa5.54□□□□□ -1.52
SNHG1-224ENST00000545688 SIRT4Q9Y6E7 314 aaPredicted RBP5.54□□□□□ -1.52
SNHG1-224ENST00000545688 FAM90A10PA6NDY2 464 aa5.53□□□□□ -1.52
SNHG1-224ENST00000545688 PSG1P11464 419 aa5.53□□□□□ -1.52
SNHG1-224ENST00000545688 HOXB6P17509 224 aaKnown RBP5.53□□□□□ -1.52
SNHG1-224ENST00000545688 DGKQP52824 942 aa5.53□□□□□ -1.52
SNHG1-224ENST00000545688 ZNF543Q08ER8 600 aa5.53□□□□□ -1.52
SNHG1-224ENST00000545688 RAPGEF1Q13905 1077 aa5.53□□□□□ -1.52
SNHG1-224ENST00000545688 KCNJ12Q14500 433 aa5.53□□□□□ -1.52
SNHG1-224ENST00000545688 EARS2Q5JPH6 523 aaKnown RBP5.53□□□□□ -1.52
SNHG1-224ENST00000545688 ZDHHC17Q8IUH5 632 aa5.53□□□□□ -1.52
SNHG1-224ENST00000545688 ATP11CQ8NB49 1132 aa5.53□□□□□ -1.52
SNHG1-224ENST00000545688 WDR24Q96S15 920 aa5.53□□□□□ -1.52
SNHG1-224ENST00000545688 TRMOQ9BU70 441 aa5.53□□□□□ -1.52
SNHG1-224ENST00000545688 DDX21Q9NR30 783 aaKnown RBP eCLIP5.53□□□□□ -1.521e-323■■■□□ 15.6
SNHG1-224ENST00000545688 KLHL42Q9P2K6 505 aa5.53□□□□□ -1.52
SNHG1-224ENST00000545688 HEMK1Q9Y5R4 338 aaPredicted RBP5.53□□□□□ -1.52
SNHG1-224ENST00000545688 NACADO15069 1562 aa5.52□□□□□ -1.53
SNHG1-224ENST00000545688 CD8B2A6NJW9 211 aa5.52□□□□□ -1.53
SNHG1-224ENST00000545688 CLCA1A8K7I4 914 aa5.52□□□□□ -1.53
SNHG1-224ENST00000545688 H3BNX3 289 aa5.52□□□□□ -1.53
SNHG1-224ENST00000545688 KPNA5O15131 536 aa5.52□□□□□ -1.53
SNHG1-224ENST00000545688 DRD1P21728 446 aa5.52□□□□□ -1.53
SNHG1-224ENST00000545688 HOXA7P31268 230 aaPredicted RBP5.52□□□□□ -1.53
SNHG1-224ENST00000545688 IDUAP35475 653 aa5.52□□□□□ -1.53
SNHG1-224ENST00000545688 CNGA3Q16281 694 aa5.52□□□□□ -1.53
SNHG1-224ENST00000545688 ZBTB26Q9HCK0 441 aa5.52□□□□□ -1.53
SNHG1-224ENST00000545688 SQORQ9Y6N5 450 aa5.52□□□□□ -1.53
SNHG1-224ENST00000545688 TTBK1Q5TCY1 1321 aaPredicted RBP5.51□□□□□ -1.53
SNHG1-224ENST00000545688 SLC22A23A1A5C7 686 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 POM121BA6NF01 834 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 AREL1O15033 823 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 CCNT2O60583 730 aaKnown RBP5.51□□□□□ -1.53
SNHG1-224ENST00000545688 TOMM40O96008 361 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 CD63P08962 238 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 FGFR2P21802 821 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 MST1P26927 711 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 VPS41P49754 854 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 BFSP2Q13515 415 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 FAXCQ5TGI0 409 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 RBM44Q6ZP01 1051 aaKnown RBP5.51□□□□□ -1.53
SNHG1-224ENST00000545688 COLCA1Q6ZS62 124 aa5.51□□□□□ -1.53
SNHG1-224ENST00000545688 PIM3Q86V86 326 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms