RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 ERLEC1Q96DZ1 483 aa15.53■□□□□ 0.08
RTN3-214ENST00000545432 TNIP3Q96KP6 325 aa15.53■□□□□ 0.08
RTN3-214ENST00000545432 MIR1-1HGQ9H1L0 117 aa15.53■□□□□ 0.08
RTN3-214ENST00000545432 LSM7Q9UK45 103 aaKnown RBP15.53■□□□□ 0.08
RTN3-214ENST00000545432 PCDHGA1Q9Y5H4 931 aa15.53■□□□□ 0.08
RTN3-214ENST00000545432 SLCO1B1Q9Y6L6 691 aa15.53■□□□□ 0.08
RTN3-214ENST00000545432 A0A087X0B3 334 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 AP1G2O75843 785 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 KLKB1P03952 638 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 PRB1P04280 392 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 DLATP10515 647 aaKnown RBP15.52■□□□□ 0.08
RTN3-214ENST00000545432 EIF2S3P41091 472 aaKnown RBP15.52■□□□□ 0.08
RTN3-214ENST00000545432 GRK6P43250 576 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 GRIA4P48058 902 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 CSNK1EP49674 416 aaKnown RBP15.52■□□□□ 0.08
RTN3-214ENST00000545432 AFF3P51826 1226 aaKnown RBP15.52■□□□□ 0.08
RTN3-214ENST00000545432 CDH8P55286 799 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 CLDN10P78369 228 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 ORC1Q13415 861 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 LARP1BQ659C4 914 aaKnown RBP15.52■□□□□ 0.08
RTN3-214ENST00000545432 CNNM4Q6P4Q7 775 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 CCDC73Q6ZRK6 1079 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 STXBP4Q6ZWJ1 553 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 CCDC65Q8IXS2 484 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 PRCCQ92733 491 aaPredicted RBP15.52■□□□□ 0.08
RTN3-214ENST00000545432 ORAI3Q9BRQ5 295 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 SMYD3Q9H7B4 428 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 NMUR1Q9HB89 426 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 AGPAT3Q9NRZ7 376 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.52■□□□□ 0.08
RTN3-214ENST00000545432 ELOVL2Q9NXB9 296 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 ZNF510Q9Y2H8 683 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 SNX11Q9Y5W9 270 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 CLIC4Q9Y696 253 aa15.52■□□□□ 0.08
RTN3-214ENST00000545432 BPTFQ12830 3046 aa15.52■□□□□ 0.07
RTN3-214ENST00000545432 MAST4O15021 2626 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 ZNF462Q96JM2 2506 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 STC2O76061 302 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 GOLGA8FQ08AF8 430 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 GOLGA8DPQ0D2H9 430 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 ZNF234Q14588 700 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 EIF4HQ15056 248 aaKnown RBP15.51■□□□□ 0.07
RTN3-214ENST00000545432 C12orf56Q8IXR9 622 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 UCMAQ8WVF2 138 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 CLIC6Q96NY7 704 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 NACA2Q9H009 215 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 SDCBP2Q9H190 292 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 PNPLA8Q9NP80 782 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 PLK2Q9NYY3 685 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 NXF1Q9UBU9 619 aaKnown RBP15.51■□□□□ 0.07
RTN3-214ENST00000545432 DNMT3LQ9UJW3 386 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.51■□□□□ 0.07
RTN3-214ENST00000545432 ANKRD6Q9Y2G4 727 aa15.51■□□□□ 0.07
RTN3-214ENST00000545432 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.51■□□□□ 0.07
RTN3-214ENST00000545432 CKAP5Q14008 2032 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 SHROOM3Q8TF72 1996 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 FAM149AA5PLN7 773 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 C10orf142B7Z368 130 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 TIMM44O43615 452 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 DFNA5O60443 496 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 TSPAN3O60637 253 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 C4BPAP04003 597 aaKnown RBP15.5■□□□□ 0.07
RTN3-214ENST00000545432 HLA-EP13747 358 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 PLA2G2AP14555 144 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 ITPKBP27987 946 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 CHKAP35790 457 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 CTSKP43235 329 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 EHHADHQ08426 723 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 TRPC3Q13507 836 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 CAMK2GQ13555 558 aaPredicted RBP15.5■□□□□ 0.07
RTN3-214ENST00000545432 RTP5Q14D33 572 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 RABEP1Q15276 862 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 TMEM215Q68D42 235 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 UNC93AQ86WB7 457 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 FAM217AQ8IXS0 508 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 XXYLT1Q8NBI6 393 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 RDH13Q8NBN7 331 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 PLEKHO2Q8TD55 490 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 MED10Q9BTT4 135 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 SLC2A11Q9BYW1 496 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 TM9SF3Q9HD45 589 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 KRT82Q9NSB4 513 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 KBTBD4Q9NVX7 518 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 KALRNO60229 2985 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 CFAP46Q8IYW2 2715 aa15.5■□□□□ 0.07
RTN3-214ENST00000545432 NUMA1Q14980 2115 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 H0Y8X5 98 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 TLX3O43711 291 aaPredicted RBP15.49■□□□□ 0.07
RTN3-214ENST00000545432 SYNCRIPO60506 623 aaKnown RBP15.49■□□□□ 0.07
RTN3-214ENST00000545432 C1SP09871 688 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 CDK4P11802 303 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 RARGP13631 454 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 ACSL1P33121 698 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 TXLNAP40222 546 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 AP3M2P53677 418 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 MAP3K7CLP57077 242 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 PDE4CQ08493 712 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 DHRS13Q6UX07 377 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 GPRIN1Q7Z2K8 1008 aa15.49■□□□□ 0.07
RTN3-214ENST00000545432 SCD5Q86SK9 330 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms