RNA–Protein interactions for RNA: ENST00000544733.5

MAP3K4-216, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 3

Gene MAP3K4, Length 645 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-216	ENST00000544733	BHLHA9	Q7RTU4	235 aa		13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	DENND1C	Q8IV53	801 aa		13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ZNF276	Q8N554	614 aa		13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	MDGA1	Q8NFP4	955 aa		13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	RNF139	Q8WU17	664 aa		13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	MED15	Q96RN5	788 aa		13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ARRDC1-AS1	Q9H2J1	176 aa		13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	SEMA4G	Q9NTN9	838 aa		13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	WDR35	Q9P2L0	1181 aa		13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	EBF1	Q9UH73	591 aa		13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	SFMBT1	Q9UHJ3	866 aa		13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
MAP3K4-216	ENST00000544733	CKAP5	Q14008	2032 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733		A0A0A0MRY4	1105 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	CACNG3	O60359	315 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ADAM23	O75077	832 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	CHRM1	P11229	460 aa	Predicted RBP	13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	MTIF2	P46199	727 aa	Known RBP	13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	DGKG	P49619	791 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	LMNB2	Q03252	620 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	CNGA2	Q16280	664 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	PLK5	Q496M5	336 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	PKDCC	Q504Y2	493 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	EOGT	Q5NDL2	527 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	BSPRY	Q5W0U4	402 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	NUDT18	Q6ZVK8	323 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	FMNL3	Q8IVF7	1028 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	CLEC4C	Q8WTT0	213 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	HMGB4	Q8WW32	186 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	P2RY11	Q96G91	374 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	DCLK3	Q9C098	648 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	MARK1	Q9P0L2	795 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	AGO1	Q9UL18	857 aa	Known RBP	13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ZNF510	Q9Y2H8	683 aa		13.57	□□□□□ -0.24
MAP3K4-216	ENST00000544733	TCRBV21S2A2	A0A5A6	115 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	MSI1	O43347	362 aa	Known RBP	13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	GABBR2	O75899	941 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ALDH1A2	O94788	518 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	EPN2	O95208	641 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	SLC9A1	P19634	815 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	USP8	P40818	1118 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ZNF132	P52740	706 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	DAOA	P59103	153 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	APBA1	Q02410	837 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	STIL	Q15468	1287 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ARHGAP44	Q17R89	818 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	USP39	Q53GS9	565 aa	Known RBP	13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	HSP90AA4P	Q58FG1	418 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	EGFLAM	Q63HQ2	1017 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	PRR23C	Q6ZRP0	262 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	DGLUCY	Q7Z3D6	616 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	RASSF3	Q86WH2	238 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	PGBD3	Q8N328	593 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	MLKL	Q8NB16	471 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	RLN3	Q8WXF3	142 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	KCTD13	Q8WZ19	329 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	MIS12	Q9H081	205 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	NUP62CL	Q9H1M0	184 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	DUSP15	Q9H1R2	295 aa	Predicted RBP	13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	SMOC1	Q9H4F8	434 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	POLM	Q9NP87	494 aa	Predicted RBP	13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	CNGB3	Q9NQW8	809 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ST7	Q9NRC1	585 aa		13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	OLA1	Q9NTK5	396 aa	Known RBP	13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	CDV3	Q9UKY7	258 aa	Known RBP	13.56	□□□□□ -0.24
MAP3K4-216	ENST00000544733	NUMA1	Q14980	2115 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	LOC105378220	A0A1B0GUY1	285 aa	Predicted RBP	13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	PRRT4	C9JH25	899 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	LRP3	O75074	770 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	LETM1	O95202	739 aa	Predicted RBP	13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	HOXB2	P14652	356 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	BCKDHB	P21953	392 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	CHKA	P35790	457 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	SF3A2	Q15428	464 aa	Known RBP	13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ELF2	Q15723	593 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	CSRP2	Q16527	193 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	DPCR1	Q3MIW9	517 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	HSF5	Q4G112	596 aa	Predicted RBP	13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	FYB2	Q5VWT5	728 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	DENND1B	Q6P3S1	775 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	TRIM65	Q6PJ69	517 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	GBP6	Q6ZN66	633 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	TRMT11	Q7Z4G4	463 aa	Known RBP	13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	IRF2BP1	Q8IU81	584 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	SLC35F5	Q8WV83	523 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	PLD4	Q96BZ4	506 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ACOX2	Q99424	681 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ACP6	Q9NPH0	428 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ABCC13	Q9NSE7	274 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	HCN2	Q9UL51	889 aa		13.55	□□□□□ -0.24
MAP3K4-216	ENST00000544733	ASCC3	Q8N3C0	2202 aa	Known RBP	13.54	□□□□□ -0.24
MAP3K4-216	ENST00000544733	PRR5-ARHGAP8	B1AHC4	643 aa		13.54	□□□□□ -0.24
MAP3K4-216	ENST00000544733	THAP12	O43422	761 aa		13.54	□□□□□ -0.24
MAP3K4-216	ENST00000544733	GDF9	O60383	454 aa		13.54	□□□□□ -0.24
MAP3K4-216	ENST00000544733	TSPAN3	O60637	253 aa		13.54	□□□□□ -0.24
MAP3K4-216	ENST00000544733	RHOBTB1	O94844	696 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms