RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 PIGZQ86VD9 579 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 WDR5BQ86VZ2 330 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 MIB1Q86YT6 1006 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 ZDHHC17Q8IUH5 632 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 RBBP8NLQ8NC74 664 aaPredicted RBP5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 TSTD1Q8NFU3 115 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 ENOX1Q8TC92 643 aaKnown RBP5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 WHAMMQ8TF30 809 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 FAM149B1Q96BN6 582 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 LOXL4Q96JB6 756 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 SERPINB11Q96P15 392 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 BBS2Q9BXC9 721 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 SLC2A11Q9BYW1 496 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 RNF38Q9H0F5 515 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 NDST4Q9H3R1 872 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 CCSER2Q9H7U1 834 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 HPS4Q9NQG7 708 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 ARHGEF4Q9NR80 690 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 RRN3Q9NYV6 651 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 HMGXB4Q9UGU5 601 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 EBF1Q9UH73 591 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 RASAL2Q9UJF2 1139 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 WNT6Q9Y6F9 365 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 TSC2P49815 1807 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 MYH10P35580 1976 aa5.87□□□□□ -1.47
CLSTN3-215ENST00000544584 NUP210Q8TEM1 1887 aaPredicted RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 A0A0A0MRY4 1105 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 SLC12A8A0AV02 714 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 ANKRD62A6NC57 917 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 KCNJ18B7U540 433 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 NEDD8-MDP1E9PL57 170 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 O00370 1275 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 GFRA2O00451 464 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 SLC30A4O14863 429 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 HOXC11O43248 304 aaPredicted RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 SYNCRIPO60506 623 aaKnown RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 RNF40O75150 1001 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 ZNF217O75362 1048 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 BEST1O76090 585 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 APOEP02649 317 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 LTFP02788 710 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 ATP5BP06576 529 aaKnown RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 TPM3P06753 285 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 GLI1P08151 1106 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 IRF1P10914 325 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 NCAM1P13591 858 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 LCP1P13796 627 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 ARSAP15289 507 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 ABCB4P21439 1286 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 BMP6P22004 513 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 SOX9P48436 509 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 DGKGP49619 791 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 CACNA2D1P54289 1103 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 MYL5Q02045 173 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 PDE4CQ08493 712 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 ADIGQ0VDE8 80 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 RAPGEF1Q13905 1077 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 SIM2Q14190 667 aaPredicted RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 KCNJ12Q14500 433 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 SKOR2Q2VWA4 1001 aaPredicted RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 MPPE1Q53F39 396 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 TCP11X2Q5H9J9 407 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 SPDYCQ5MJ68 293 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 LY6G5CQ5SRR4 150 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 BSPRYQ5W0U4 402 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 PRR23BQ6ZRT6 265 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 BEND5Q7L4P6 421 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 ZNF677Q86XU0 584 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 KDF1Q8NAX2 398 aaPredicted RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 ZBTB44Q8NCP5 570 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 TMEM35BQ8NCS4 154 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 C1orf131Q8NDD1 294 aaKnown RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 ZMIZ2Q8NF64 920 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 RPLP0P6Q8NHW5 317 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 DDI1Q8WTU0 396 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 RNF34Q969K3 372 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 RSPRY1Q96DX4 576 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 PCMTD1Q96MG8 357 aaPredicted RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 LRRC3BQ96PB8 259 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 SPAG5Q96R06 1193 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 TWNKQ96RR1 684 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 SLC22A12Q96S37 553 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 KLF16Q9BXK1 252 aaPredicted RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 LHX5Q9H2C1 402 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 EPC1Q9H2F5 836 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 LINC00597Q9H2U6 94 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 POPDC2Q9HBU9 364 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 LMBRD1Q9NUN5 540 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 DNAJC17Q9NVM6 304 aaKnown RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 BCCIPQ9P287 314 aaKnown RBP eCLIP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 PLA2G4CQ9UP65 541 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 CNTN6Q9UQ52 1028 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 NFE2L3Q9Y4A8 694 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 SMG1Q96Q15 3661 aaKnown RBP5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 DMXL2Q8TDJ6 3036 aa5.86□□□□□ -1.47
CLSTN3-215ENST00000544584 DSPP15924 2871 aaKnown RBP5.85□□□□□ -1.47
CLSTN3-215ENST00000544584 WDFY3Q8IZQ1 3526 aa5.85□□□□□ -1.47
CLSTN3-215ENST00000544584 HHLA1C9JL84 531 aa5.85□□□□□ -1.47
CLSTN3-215ENST00000544584 TAF4O00268 1085 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms