RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 NFATC1O95644 943 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 CER1O95813 267 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 CDK4P11802 303 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 C6P13671 934 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 ARSAP15289 507 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 HNF1BP35680 557 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 CCNFP41002 786 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 IFNAR2P48551 515 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 UCNP55089 124 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 MYBPC2Q14324 1141 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 MTF1Q14872 753 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SMAD1Q15797 465 aaKnown RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 PPP2R5EQ16537 467 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 FXNQ16595 210 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 DDR2Q16832 855 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SGO2Q562F6 1265 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 C2orf27AQ580R0 203 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 WDR45BQ5MNZ6 344 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 PRAMEF13Q5VWM6 474 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 RALGAPA1Q6GYQ0 2036 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 ARMCX5Q6P1M9 558 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SEZ6L2Q6UXD5 910 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 TRMT11Q7Z4G4 463 aaKnown RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SLCO6A1Q86UG4 719 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 TMPRSS12Q86WS5 348 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 NOSTRINQ8IVI9 506 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 ARMC10Q8N2F6 343 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 MCPH1Q8NEM0 835 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 FBLIM1Q8WUP2 373 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 RLN3Q8WXF3 142 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 MRPS31Q92665 395 aaKnown RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 EVPLQ92817 2033 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 MYRFLQ96LU7 910 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 CCDC74BQ96LY2 380 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 PGLYRP2Q96PD5 576 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 NAP1L4Q99733 375 aaKnown RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 CCDC94Q9BW85 323 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SSBP4Q9BWG4 385 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SLC46A2Q9BY10 475 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 LRRC2Q9BYS8 371 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 CEP295Q9C0D2 2601 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 CCDC113Q9H0I3 377 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SEMA6CQ9H3T2 930 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 FBRSL1Q9HCM7 1045 aaKnown RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SSU72Q9NP77 194 aaKnown RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 FSCN3Q9NQT6 498 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 SH3GLB2Q9NR46 395 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 DUS2Q9NX74 493 aaKnown RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 WRAP73Q9P2S5 460 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 VAV3Q9UKW4 847 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 NFE2L3Q9Y4A8 694 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 PCDHGB2Q9Y5G2 931 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 RBM8AQ9Y5S9 174 aaKnown RBP4.42□□□□□ -1.7
SNHG1-220ENST00000544550 PHLPP2Q6ZVD8 1323 aa4.42□□□□□ -1.7
SNHG1-220ENST00000544550 KLF18A0A0U1RQI7 1052 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 A0A1B0GTW7 788 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 TCRBV21S2A2A0A5A6 115 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 MTMR11A4FU01 709 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 MYMKA6NI61 221 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 K7EQS6 105 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 M0QZQ0 153 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 TNFSF14O43557 240 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 EDIL3O43854 480 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 LRIG2O94898 1065 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 LYPLA2O95372 231 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 BAG4O95429 457 aaKnown RBP4.41□□□□□ -1.7
SNHG1-220ENST00000544550 NFICP08651 508 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 XRCC6P12956 609 aaKnown RBP eCLIP4.41□□□□□ -1.7
SNHG1-220ENST00000544550 KCNE1P15382 129 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 GCFC2P16383 781 aaKnown RBP4.41□□□□□ -1.7
SNHG1-220ENST00000544550 RAB6AP20340 208 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 PAX3P23760 479 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 U2AF2P26368 475 aaKnown RBP eCLIP4.41□□□□□ -1.73e-8■■■□□ 17.8
SNHG1-220ENST00000544550 ITPKBP27987 946 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 EIF2DP41214 584 aaKnown RBP4.41□□□□□ -1.7
SNHG1-220ENST00000544550 MATKP42679 507 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 RARRES1P49788 294 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 PDE6CP51160 858 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 EFNA5P52803 228 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 NLRP5P59047 1200 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 CXADRP78310 365 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 CYP4F8P98187 520 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 NUCB1Q02818 461 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 SMARCB1Q12824 385 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 GRIK2Q13002 908 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 CTTNQ14247 550 aaKnown RBP4.41□□□□□ -1.7
SNHG1-220ENST00000544550 PPP2R5AQ15172 486 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 INAVAQ3KP66 663 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 MGAT5BQ3V5L5 792 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 XKR4Q5GH76 650 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 ATF7IP2Q5U623 682 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 BROXQ5VW32 411 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 NCAPH2Q6IBW4 605 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 CENPPQ6IPU0 288 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 GALNT17Q6IS24 598 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 TPH2Q8IWU9 490 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 FAM20CQ8IXL6 584 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 SMC5Q8IY18 1101 aa4.41□□□□□ -1.7
SNHG1-220ENST00000544550 FAM177A1Q8N128 213 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-220ENST00000544550 MAB21L3Q8N8X9 362 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms