RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 UBE3AQ05086 875 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 PWP1Q13610 501 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 AADACL2Q6P093 401 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 LPCAT1Q8NF37 534 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 THAP11Q96EK4 314 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 ZFYVE19Q96K21 471 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 TLR8Q9NR97 1041 aaKnown RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 LRRC4BQ9NT99 713 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 DNPEPQ9ULA0 475 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 PCDHB5Q9Y5E4 795 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 F8VP50 259 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 RECQL4O94761 1208 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 HSPA1AP0DMV8 641 aaKnown RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 HSPA1BP0DMV9 641 aaKnown RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 RFX3P48380 749 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 TUBP50607 506 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 RAP1GDS1P52306 607 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 TBX4P57082 545 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 FSCN1Q16658 493 aaKnown RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 TRIM48Q8IWZ4 208 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 PRPF18Q99633 342 aaKnown RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 GAKO14976 1311 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 BDNFP23560 247 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 SKOR1P84550 965 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 STX5Q13190 355 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 ARMC6Q6NXE6 501 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 BTNL9Q6UXG8 535 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 OTOAQ7RTW8 1153 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 MTDHQ86UE4 582 aaKnown RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 WDR18Q9BV38 432 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 TAS2R14Q9NYV8 317 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 DTNAQ9Y4J8 743 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 GOLGA8TH3BQL2 631 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 CPA3P15088 417 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 PECAM1P16284 738 aaPredicted RBP13.17□□□□□ -0.3
CHD4-211ENST00000544484 ITGALP20701 1170 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 MIPP30301 263 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 ZBTB17Q13105 803 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 TMEM154Q6P9G4 183 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 MYO1HQ8N1T3 1032 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 PHF21BQ96EK2 531 aa13.17□□□□□ -0.3
CHD4-211ENST00000544484 WDR27A2RRH5 827 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 USP17L7P0C7H9 530 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 OR1E1P30953 314 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 CDC16Q13042 620 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 AASDHQ4L235 1098 aaPredicted RBP13.16□□□□□ -0.3
CHD4-211ENST00000544484 A0A0U1RQJ8 604 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 KPNA6O60684 536 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 CRTAMO95727 393 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 CYP3A4P08684 503 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 KRT16P08779 473 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 TBX2Q13207 712 aaPredicted RBP13.16□□□□□ -0.3
CHD4-211ENST00000544484 SEL1L3Q68CR1 1132 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 VSIG10LQ86VR7 867 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 PLEKHA8Q96JA3 519 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 PTPRHQ9HD43 1115 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 SAE1Q9UBE0 346 aaPredicted RBP13.16□□□□□ -0.3
CHD4-211ENST00000544484 USP12O75317 370 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 PSMD10O75832 226 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 MGAT1P26572 445 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 MOB2Q70IA6 237 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 EIF3LQ9Y262 564 aaKnown RBP13.16□□□□□ -0.3
CHD4-211ENST00000544484 PCDHA3Q9Y5H8 950 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 RIPK2O43353 540 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 ALOX15P16050 662 aaPredicted RBP13.16□□□□□ -0.3
CHD4-211ENST00000544484 MAP3K10Q02779 954 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 MGAT5Q09328 741 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
CHD4-211ENST00000544484 ZNF284Q2VY69 593 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 RBBP8Q99708 897 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 CYP39A1Q9NYL5 469 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 RAMP2O60895 175 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 PRIM2P49643 509 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 HPCAP84074 193 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 RCN1Q15293 331 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 SLC39A12Q504Y0 691 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 SH3RF1Q7Z6J0 888 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 KIAA0319LQ8IZA0 1049 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 IL31RAQ8NI17 732 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 HTR3CQ8WXA8 447 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 ERLEC1Q96DZ1 483 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 PORCNQ9H237 461 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 KCNMB3Q9NPA1 279 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 EXOSC4Q9NPD3 245 aaKnown RBP13.16□□□□□ -0.3
CHD4-211ENST00000544484 CHST7Q9NS84 486 aa13.16□□□□□ -0.3
CHD4-211ENST00000544484 MANSC4A6NHS7 340 aaPredicted RBP13.15□□□□□ -0.3
CHD4-211ENST00000544484 CACHD1Q5VU97 1274 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 TAF2Q6P1X5 1199 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 UCMAQ8WVF2 138 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 SMARCD1Q96GM5 515 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 TMEM120AQ9BXJ8 343 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 DRG1Q9Y295 367 aaKnown RBP13.15□□□□□ -0.3
CHD4-211ENST00000544484 CXCL17Q6UXB2 119 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 MKL1Q969V6 931 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 ATP6V1B1P15313 513 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 GJC2Q5T442 439 aaPredicted RBP13.15□□□□□ -0.3
CHD4-211ENST00000544484 CATSPERGQ6ZRH7 1159 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 ADAM2Q99965 735 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 CACNA2D2Q9NY47 1150 aa13.15□□□□□ -0.3
CHD4-211ENST00000544484 DNALI1O14645 258 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms