RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 ATXN10Q9UBB4 475 aa15.57■□□□□ 0.08
CHFR-223ENST00000544268 TRIM17Q9Y577 477 aa15.57■□□□□ 0.08
CHFR-223ENST00000544268 TRPV2Q9Y5S1 764 aa15.57■□□□□ 0.08
CHFR-223ENST00000544268 SIGLEC16A6NMB1 481 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 GOLGA8RI6L899 631 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 TCEA3O75764 348 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 LSM8O95777 96 aaKnown RBP15.56■□□□□ 0.08
CHFR-223ENST00000544268 SKIP12755 728 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 CYP3A5P20815 502 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 ITGA7Q13683 1181 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 CDO1Q16878 200 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 C15orf59Q2T9L4 293 aaPredicted RBP15.56■□□□□ 0.08
CHFR-223ENST00000544268 UBXN11Q5T124 520 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 RSPH3Q86UC2 560 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 TRABD2AQ86V40 505 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 XYLT1Q86Y38 959 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 TRIM42Q8IWZ5 723 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 SDR16C5Q8N3Y7 309 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 FAM71DQ8N9W8 422 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 SLC35B2Q8TB61 432 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 CPT1BQ92523 772 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 PTPRN2Q92932 1015 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 NDNQ99608 321 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 LPIN3Q9BQK8 851 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 SYNCQ9H7C4 482 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 HMX1Q9NP08 348 aaPredicted RBP15.56■□□□□ 0.08
CHFR-223ENST00000544268 STOML1Q9UBI4 398 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 TMEM63AO94886 807 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 AKAP5P24588 427 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 VHLP40337 213 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 PIGHQ14442 188 aaPredicted RBP15.56■□□□□ 0.08
CHFR-223ENST00000544268 ARHGEF6Q15052 776 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 SLC1A5Q15758 541 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 VSIG1Q86XK7 387 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 ARHGAP18Q8N392 663 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 CCDC33Q8N5R6 958 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 KIF12Q96FN5 646 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 SNX27Q96L92 541 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 ZMAT2Q96NC0 199 aaKnown RBP15.56■□□□□ 0.08
CHFR-223ENST00000544268 MAK16Q9BXY0 300 aaKnown RBP15.56■□□□□ 0.08
CHFR-223ENST00000544268 SENP6Q9GZR1 1112 aaPredicted RBP15.56■□□□□ 0.08
CHFR-223ENST00000544268 VCX3BQ9H321 246 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 VCX3AQ9NNX9 186 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 TRMT13Q9NUP7 481 aaKnown RBP15.56■□□□□ 0.08
CHFR-223ENST00000544268 DNAAF2Q9NVR5 837 aaKnown RBP15.56■□□□□ 0.08
CHFR-223ENST00000544268 NMRK1Q9NWW6 199 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 PCDHGC3Q9UN70 934 aa15.56■□□□□ 0.08
CHFR-223ENST00000544268 RECQL4O94761 1208 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 MICAL2O94851 1124 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 KRT15P19012 456 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 MIPP30301 263 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 GSTT1P30711 240 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 CDH5P33151 784 aaPredicted RBP15.55■□□□□ 0.08
CHFR-223ENST00000544268 RPL22P35268 128 aaKnown RBP15.55■□□□□ 0.08
CHFR-223ENST00000544268 CACNA2D1P54289 1103 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 RNASELQ05823 741 aaKnown RBP15.55■□□□□ 0.08
CHFR-223ENST00000544268 STAT4Q14765 748 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 MTFR1Q15390 333 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 ZC3H18Q86VM9 953 aaKnown RBP15.55■□□□□ 0.08
CHFR-223ENST00000544268 IGDCC3Q8IVU1 814 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 AZIN2Q96A70 460 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 CALN1Q9BXU9 219 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 PDP2Q9P2J9 529 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 MAGEA13PA6NCF6 341 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 M0QYV0 167 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 KDELR1P24390 212 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 POLR2BP30876 1174 aaKnown RBP15.55■□□□□ 0.08
CHFR-223ENST00000544268 THPOP40225 353 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 OCRLQ01968 901 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 MYBPC3Q14896 1274 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 CCDC142Q17RM4 750 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 GLRA4Q5JXX5 417 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 RELL1Q8IUW5 271 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 MIPOL1Q8TD10 442 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 GBP5Q96PP8 586 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 MAGEB5Q9BZ81 275 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 MYLK2Q9H1R3 596 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 TRABDQ9H4I3 376 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 PLEKHA5Q9HAU0 1116 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 GPATCH2LQ9NWQ4 482 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 DPP3Q9NY33 737 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 NKIRAS1Q9NYS0 192 aa15.55■□□□□ 0.08
CHFR-223ENST00000544268 WDR91A4D1P6 747 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 H0Y3Z8 333 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 SMAPO00193 183 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 HCRTO43612 131 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 AVILO75366 819 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 ATP5DP30049 168 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 RGS7P49802 495 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 RASSF2P50749 326 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 YARSP54577 528 aaKnown RBP15.54■□□□□ 0.08
CHFR-223ENST00000544268 MGAT3Q09327 533 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 RCN2Q14257 317 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 ZNF667Q5HYK9 610 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 LRRC38Q5VT99 294 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 NCSTNQ92542 709 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 NKD2Q969F2 451 aaPredicted RBP15.54■□□□□ 0.08
CHFR-223ENST00000544268 TBC1D10AQ9BXI6 508 aa15.54■□□□□ 0.08
CHFR-223ENST00000544268 ALG13Q9NP73 1137 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms