RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 LIFRP42702 1097 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 UBE3AQ05086 875 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 SF3A3Q12874 501 aaKnown RBP eCLIP4.22□□□□□ -1.73
SCFD1-207ENST00000544052 EFR3AQ14156 821 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 R3HDM1Q15032 1099 aaKnown RBP4.22□□□□□ -1.73
SCFD1-207ENST00000544052 TBCCQ15814 346 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 LRRC24Q50LG9 513 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 C1orf210Q8IVY1 113 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 TMEM57Q8N5G2 664 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 CXorf38Q8TB03 319 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 XAGE5Q8WWM1 108 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 CPT1BQ92523 772 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 TTPALQ9BTX7 342 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 CCDC134Q9H6E4 229 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 UBN1Q9NPG3 1134 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 WASH6PQ9NQA3 447 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 G6PC2Q9NQR9 355 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 TMEM160Q9NX00 188 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 NKX1-2Q9UD57 310 aaPredicted RBP4.22□□□□□ -1.73
SCFD1-207ENST00000544052 STEAP1Q9UHE8 339 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 ASAP1Q9ULH1 1129 aa4.22□□□□□ -1.73
SCFD1-207ENST00000544052 ADAMTSL3P82987 1691 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 FAM90A20PA6NIJ5 464 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 STX16-NPEPL1H3BU86 382 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 STX16O14662 325 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 CTIFO43310 598 aaKnown RBP4.21□□□□□ -1.74
SCFD1-207ENST00000544052 CA12O43570 354 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 FAM163BP0C2L3 166 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 TMEM225BP0DP42 221 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 BDNFP23560 247 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 DDIT3P35638 169 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 EIF4A1P60842 406 aaKnown RBP4.21□□□□□ -1.74
SCFD1-207ENST00000544052 BFSP2Q13515 415 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 SMAD1Q15797 465 aaKnown RBP4.21□□□□□ -1.74
SCFD1-207ENST00000544052 AASDHQ4L235 1098 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-207ENST00000544052 USP39Q53GS9 565 aaKnown RBP4.21□□□□□ -1.74
SCFD1-207ENST00000544052 FAM180BQ6P0A1 224 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 DBX2Q6ZNG2 339 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 TRABD2AQ86V40 505 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 SOCS4Q8WXH5 440 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 RRP36Q96EU6 259 aaKnown RBP4.21□□□□□ -1.74
SCFD1-207ENST00000544052 PRR11Q96HE9 360 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-207ENST00000544052 TWNKQ96RR1 684 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 ZCWPW1Q9H0M4 648 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 ABHD16BQ9H3Z7 469 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 RMI1Q9H9A7 625 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 FBXO9Q9UK97 447 aaPredicted RBP4.21□□□□□ -1.74
SCFD1-207ENST00000544052 DNAJC16Q9Y2G8 782 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 TTC37Q6PGP7 1564 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 HECW2Q9P2P5 1572 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 TEX14Q8IWB6 1497 aa4.21□□□□□ -1.74
SCFD1-207ENST00000544052 MUSKO15146 869 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 XBP1P17861 261 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 LAG3P18627 525 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 BMPR1AP36894 532 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 ZEB1P37275 1124 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-207ENST00000544052 GSTM5P46439 218 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 SELENOPP49908 381 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 RBM5P52756 815 aaKnown RBP eCLIP4.2□□□□□ -1.74
SCFD1-207ENST00000544052 NR1H2P55055 460 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 FAM3BP58499 235 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-207ENST00000544052 RNASELQ05823 741 aaKnown RBP4.2□□□□□ -1.74
SCFD1-207ENST00000544052 DEUP1Q05D60 604 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 ITIH3Q06033 890 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 TRPC3Q13507 836 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 CLCA4Q14CN2 919 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 ERICH6BQ5W0A0 696 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 SYNE3Q6ZMZ3 975 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 KRT27Q7Z3Y8 459 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 ANKS1BQ7Z6G8 1248 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 CHST13Q8NET6 341 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 SLC25A43Q8WUT9 341 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-207ENST00000544052 FKBP10Q96AY3 582 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 C8orf49Q96NF6 230 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 SENP7Q9BQF6 1050 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 DPCDQ9BVM2 203 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-207ENST00000544052 TMX4Q9H1E5 349 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-207ENST00000544052 ANKFY1Q9P2R3 1169 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 RCE1Q9Y256 329 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 FHOD3Q2V2M9 1422 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 ADGRA2Q96PE1 1338 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 ARAP3Q8WWN8 1544 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 LOC105369274A0A096LPK9 316 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 LOC102723532A0A0G2JNH3 316 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 SLC38A8A6NNN8 435 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 HMGB1P1B2RPK0 211 aaPredicted RBP4.2□□□□□ -1.74
SCFD1-207ENST00000544052 AP4M1O00189 453 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 SPRY2O43597 315 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 CHRM2P08172 466 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 ITGAMP11215 1152 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 GUCY1B3Q02153 619 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 TLE2Q04725 743 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 CHRNDQ07001 517 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 MAPK7Q13164 816 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 SEMA3BQ13214 749 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 CYP1B1Q16678 543 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 FAM90A2PQ658T7 463 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 ANKRD40Q6AI12 368 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 OR4N4Q8N0Y3 316 aa4.2□□□□□ -1.74
SCFD1-207ENST00000544052 ASB10Q8WXI3 467 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms