RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 FAM204AQ9H8W3 233 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MRPL47Q9HD33 250 aaKnown RBP15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 LUC7LQ9NQ29 371 aaKnown RBP15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 OBP2AQ9NY56 170 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 RRN3Q9NYV6 651 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 CFAP97Q9P2B7 532 aa15.11■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SYNJ2BP-COX16A0A087WUM0 186 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TCRBV5S1A1TA0A578 114 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 EIF3CLB5ME19 914 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 M0QYT0 321 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ZNF263O14978 683 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TRUB2O95900 331 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PDGFRAP16234 1089 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SDC4P31431 198 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 GBP1P32455 592 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 RFC1P35251 1148 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 KPNA1P52294 538 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 NME3Q13232 169 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 GRM2Q14416 872 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ZNF77Q15935 545 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PLEKHA7Q6IQ23 1121 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 CC2D1AQ6P1N0 951 aaPredicted RBP15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 VITQ6UXI7 678 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 RAD9BQ6WBX8 426 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TAC4Q86UU9 113 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TMEM139Q8IV31 216 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MFSD6LQ8IWD5 586 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 GJD3Q8N144 294 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 CCDC112Q8NEF3 446 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 RXFP2Q8WXD0 754 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 RSPRY1Q96DX4 576 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ZFRQ96KR1 1074 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 CFAP57Q96MR6 1250 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 EIF3CQ99613 913 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PLA2G2FQ9BZM2 168 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 THG1LQ9NWX6 298 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 COX16Q9P0S2 106 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 LSM7Q9UK45 103 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 HBS1LQ9Y450 684 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MYO10Q9HD67 2058 aa15.1■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SCAMP3O14828 347 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 LCA5LO95447 670 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 DESP17661 470 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PSMC3P17980 439 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 GPD1P21695 349 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 MAGEA1P43355 309 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TBX4P57082 545 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 RPL7AP62424 266 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PITX1P78337 314 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 USP4Q13107 963 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TRIP4Q15650 581 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 CDO1Q16878 200 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SLC25A52Q3SY17 297 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TRNP1Q6NT89 227 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 DEPDC1BQ8WUY9 529 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 RNF34Q969K3 372 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 NECAB3Q96P71 396 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 DDX23Q9BUQ8 820 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TRMT61BQ9BVS5 477 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 NUP85Q9BW27 656 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 DDIT4Q9NX09 232 aa15.09■□□□□ 0.01
TNFRSF1A-216ENST00000543995 C2CD4BA6NLJ0 364 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 IRAK2O43187 625 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 STC2O76061 302 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TMEM253P0C7T8 217 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TCF3P15923 654 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 HARS2P49590 506 aaKnown RBP15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ATP11AP98196 1134 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PPP1R15BQ5SWA1 713 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SND1Q7KZF4 910 aaKnown RBP eCLIP15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 SLC44A3Q8N4M1 653 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 RIN3Q8TB24 985 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PLD4Q96BZ4 506 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 ARHGEF26Q96DR7 871 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PDLIM2Q96JY6 352 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 LRRC3BQ96PB8 259 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TBCBQ99426 244 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 NPY6RQ99463 290 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 CTTNBP2NLQ9P2B4 639 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 TLR6Q9Y2C9 796 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 PCDHA13Q9Y5I0 950 aa15.08■□□□□ 0.01
TNFRSF1A-216ENST00000543995 E2F8A0AVK6 867 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 CYP1A2P05177 515 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 CORO1AP31146 461 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 GDI1P31150 447 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 DEUP1Q05D60 604 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 FCHO2Q0JRZ9 810 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 NNTQ13423 1086 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 TDGQ13569 410 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 C15orf59Q2T9L4 293 aaPredicted RBP15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 CCDC14Q49A88 953 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 RNF135Q8IUD6 432 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 WBP2Q969T9 261 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 UHRF1Q96T88 793 aaPredicted RBP15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 DCLK3Q9C098 648 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 DUS2Q9NX74 493 aaKnown RBP15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 INTUQ9ULD6 942 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 TMEM191CA6NGB0 347 aa15.07■□□□□ 0
TNFRSF1A-216ENST00000543995 SLC9A3R1O14745 358 aaPredicted RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms