RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 USP27XA6NNY8 438 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 SOBPA7XYQ1 873 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 IRAK2O43187 625 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 COCHO43405 550 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 PRPSAP2O60256 369 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 BUB1BO60566 1050 aaPredicted RBP12.39□□□□□ -0.43
DDB1-223ENST00000543658 PALMO75781 387 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 PAPLNO95428 1278 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 OAS1P00973 400 aaKnown RBP12.39□□□□□ -0.43
DDB1-223ENST00000543658 APOEP02649 317 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 CEBPBP17676 345 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 HDCP19113 662 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 MAN1A1P33908 653 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 TBX4P57082 545 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 COG7P83436 770 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 NNTQ13423 1086 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 SLC5A9Q2M3M2 681 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 ARL13BQ3SXY8 428 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 CCDC14Q49A88 953 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 PRSS36Q5K4E3 855 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 SCYL2Q6P3W7 929 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 KLHDC10Q6PID8 442 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 PEX26Q7Z412 305 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 TMEM150AQ86TG1 271 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 DDX42Q86XP3 938 aaKnown RBP eCLIP12.39□□□□□ -0.43
DDB1-223ENST00000543658 NIPA2Q8N8Q9 360 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 ARL14EPQ8N8R7 260 aaPredicted RBP12.39□□□□□ -0.43
DDB1-223ENST00000543658 ADAM32Q8TC27 787 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.43
DDB1-223ENST00000543658 TCEAL4Q96EI5 215 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 NPY6RQ99463 290 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 TRIM7Q9C029 511 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 TASP1Q9H6P5 420 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 WDR6Q9NNW5 1121 aaKnown RBP12.39□□□□□ -0.43
DDB1-223ENST00000543658 KCND1Q9NSA2 647 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 SLC12A6Q9UHW9 1150 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 AMFRQ9UKV5 643 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 CAPN6Q9Y6Q1 641 aa12.39□□□□□ -0.43
DDB1-223ENST00000543658 DOCK8Q8NF50 2099 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 MDM4O15151 490 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 MSI1O43347 362 aaKnown RBP12.38□□□□□ -0.43
DDB1-223ENST00000543658 FYNP06241 537 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 HMBSP08397 361 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 IRF1P10914 325 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 SLC2A3P11169 496 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 TNNT1P13805 278 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 KCNA5P22460 613 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 GBP2P32456 591 aaPredicted RBP12.38□□□□□ -0.43
DDB1-223ENST00000543658 GJC1P36383 396 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 CCR2P41597 374 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 PGFP49763 221 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 OGDHQ02218 1023 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 DLX2Q07687 328 aaPredicted RBP12.38□□□□□ -0.43
DDB1-223ENST00000543658 COL19A1Q14993 1142 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 TRIP4Q15650 581 aaPredicted RBP12.38□□□□□ -0.43
DDB1-223ENST00000543658 ZNF569Q5MCW4 686 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 BRMS1LQ5PSV4 323 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 TRNP1Q6NT89 227 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 CC2D1AQ6P1N0 951 aaPredicted RBP12.38□□□□□ -0.43
DDB1-223ENST00000543658 C17orf53Q8N3J3 647 aaPredicted RBP12.38□□□□□ -0.43
DDB1-223ENST00000543658 ATP6V0D2Q8N8Y2 350 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 SMRP1Q8NCR6 262 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 TTC16Q8NEE8 873 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 HLA-CQ95604 372 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 PLD4Q96BZ4 506 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 PGAP3Q96FM1 320 aaPredicted RBP12.38□□□□□ -0.43
DDB1-223ENST00000543658 MSLNLQ96KJ4 702 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 WDCPQ9H6R7 721 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 SALL4Q9UJQ4 1053 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 LSM7Q9UK45 103 aaKnown RBP12.38□□□□□ -0.43
DDB1-223ENST00000543658 TLR6Q9Y2C9 796 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.38□□□□□ -0.43
DDB1-223ENST00000543658 SH3BP1Q9Y3L3 701 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 HBS1LQ9Y450 684 aaKnown RBP12.38□□□□□ -0.43
DDB1-223ENST00000543658 CPQQ9Y646 472 aa12.38□□□□□ -0.43
DDB1-223ENST00000543658 GRID2IPA4D2P6 1211 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 H3BQ06 376 aaPredicted RBP12.37□□□□□ -0.43
DDB1-223ENST00000543658 TBX18O95935 607 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 KRT7P08729 469 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 COMTP21964 271 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 CCR1P32246 355 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 PCK1P35558 622 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 LTBRP36941 435 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 HARS2P49590 506 aaKnown RBP12.37□□□□□ -0.43
DDB1-223ENST00000543658 GNG11P61952 73 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 ZNF252P-AS1Q0IIN9 211 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 MTA1Q13330 715 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 SMAD4Q13485 552 aaKnown RBP12.37□□□□□ -0.43
DDB1-223ENST00000543658 CBX2Q14781 532 aaPredicted RBP12.37□□□□□ -0.43
DDB1-223ENST00000543658 STXBP5Q5T5C0 1151 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 NUGGCQ68CJ6 796 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 FAM131BQ86XD5 332 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 UNC45BQ8IWX7 931 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 CMTM8Q8IZV2 173 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 UBL4BQ8N7F7 174 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 ITFG1Q8TB96 612 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 S1PR5Q9H228 398 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 SMPD4Q9NXE4 827 aa12.37□□□□□ -0.43
DDB1-223ENST00000543658 USP18Q9UMW8 372 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms