RNA–Protein interactions for RNA: ENST00000542838.5

DDX11-223, Transcript of DEAD/H-box helicase 11, human

APPRIS P1 TSL 1 (best) BASIC

Gene DDX11, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-223	ENST00000542838	MPZL3	Q6UWV2	235 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	RASSF3	Q86WH2	238 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	LRRC71	Q8N4P6	559 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	PQLC3	Q8N755	202 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	SIGLEC10	Q96LC7	697 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	HEXIM2	Q96MH2	286 aa	Known RBP	13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	MMP19	Q99542	508 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	EBNA1BP2	Q99848	306 aa	Known RBP	13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	TEX13B	Q9BXU2	312 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	SIX4	Q9UIU6	781 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	SORCS3	Q9UPU3	1222 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	RLF	Q13129	1914 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	RNASEH1	O60930	286 aa	Known RBP	13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	IL4R	P24394	825 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	RPL10A	P62906	217 aa	Known RBP	13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	IER5	Q5VY09	327 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	SESTD1	Q86VW0	696 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	NIM1K	Q8IY84	436 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	TTLL6	Q8N841	843 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	MCU	Q8NE86	351 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	OR6Y1	Q8NGX8	325 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	PIWIL2	Q8TC59	973 aa	Known RBP	13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	FAM172A	Q8WUF8	416 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	PIWIL1	Q96J94	861 aa	Known RBP	13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	APOBEC2	Q9Y235	224 aa	Known RBP	13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	ANK1	P16157	1881 aa		13.37	□□□□□ -0.27
DDX11-223	ENST00000542838	CXCL8	P10145	99 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	UBA1	P22314	1058 aa	Known RBP	13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	EPHB1	P54762	984 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	CNTN2	Q02246	1040 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	ASPH	Q12797	758 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	TNFAIP1	Q13829	316 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	PDK2	Q15119	407 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	CNPY1	Q3B7I2	92 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	RALGPS1	Q5JS13	557 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	ATF7IP2	Q5U623	682 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	FAM160B1	Q5W0V3	765 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	FAM183BP	Q6ZVS7	135 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	ILDR2	Q71H61	639 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	DHDDS	Q86SQ9	333 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	TMEM192	Q8IY95	271 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	ZNF778	Q96MU6	729 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	NGRN	Q9NPE2	291 aa	Known RBP	13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	PCDHA11	Q9Y5I1	949 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	CILP	O75339	1184 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	KLHL2	O95198	593 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	METTL18	O95568	372 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	MAGEA6	P43360	314 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	CXCL9	Q07325	125 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	TUBB3	Q13509	450 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	DENND5B	Q6ZUT9	1274 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	ZNF534	Q76KX8	674 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	ADGRG6	Q86SQ4	1221 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	C1orf127	Q8N9H9	656 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	PCDH19	Q8TAB3	1148 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	SLC26A7	Q8TE54	656 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	RPF1	Q9H9Y2	349 aa	Known RBP	13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	PCDH18	Q9HCL0	1135 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	ITGB3	P05106	788 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	SLC1A6	P48664	564 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	CDK7	P50613	346 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	LIN52	Q52LA3	116 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	TEDDM1	Q5T9Z0	273 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	EEF1DP3	Q658K8	133 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	DPY19L2	Q6NUT2	758 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	PDSS2	Q86YH6	399 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	ZNF280C	Q8ND82	737 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	GORASP1	Q9BQQ3	440 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	SIKE1	Q9BRV8	207 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	CENPK	Q9BS16	269 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	CCDC28B	Q9BUN5	200 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	SPATA16	Q9BXB7	569 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	IL1RAPL1	Q9NZN1	696 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	ADAMTS5	Q9UNA0	930 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	AFG3L2	Q9Y4W6	797 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	LCT	P09848	1927 aa		13.36	□□□□□ -0.27
DDX11-223	ENST00000542838	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	B4GALT5	O43286	388 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	FARP2	O94887	1054 aa	Predicted RBP	13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	EGFR	P00533	1210 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	NFIC	P08651	508 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	VDR	P11473	427 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	TCF7	P36402	384 aa	Predicted RBP	13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	COPA	P53621	1224 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	DYNC1I2	Q13409	638 aa	Known RBP	13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	CUL3	Q13618	768 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	HNRNPD	Q14103	355 aa	Known RBP	13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	CA9	Q16790	459 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	BOLA3	Q53S33	107 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	LPCAT4	Q643R3	524 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	MBLAC2	Q68D91	279 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	TIFAB	Q6ZNK6	161 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	ACAD11	Q709F0	780 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	RSPH3	Q86UC2	560 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	ST13P4	Q8IZP2	240 aa	Predicted RBP	13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	AZIN2	Q96A70	460 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	ZCWPW1	Q9H0M4	648 aa		13.35	□□□□□ -0.27
DDX11-223	ENST00000542838	AS3MT	Q9HBK9	375 aa		13.35	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms