RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 ZFXP17010 805 aaPredicted RBP14.7□□□□□ -0.06
LDB3-207ENST00000542786 GOT1P17174 413 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 PCSK1P29120 753 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 RDXP35241 583 aaKnown RBP14.7□□□□□ -0.06
LDB3-207ENST00000542786 BRCC3P46736 316 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 TUSC3Q13454 348 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 RTN4RL1Q86UN2 441 aaPredicted RBP14.7□□□□□ -0.06
LDB3-207ENST00000542786 TRABD2AQ86V40 505 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 ATP11CQ8NB49 1132 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 LINC01599Q8WXQ3 324 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 FAM149B1Q96BN6 582 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 RHOBTB2Q9BYZ6 727 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 PPCSQ9HAB8 311 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 PRDM16Q9HAZ2 1276 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 WDR6Q9NNW5 1121 aaKnown RBP14.7□□□□□ -0.06
LDB3-207ENST00000542786 CNGB3Q9NQW8 809 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 ARHGEF4Q9NR80 690 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 PIGVQ9NUD9 493 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 INTS9Q9NV88 658 aaKnown RBP14.7□□□□□ -0.06
LDB3-207ENST00000542786 DTLQ9NZJ0 730 aa14.7□□□□□ -0.06
LDB3-207ENST00000542786 RRP15Q9Y3B9 282 aaKnown RBP14.7□□□□□ -0.06
LDB3-207ENST00000542786 ATXN2Q99700 1313 aaKnown RBP14.7□□□□□ -0.06
LDB3-207ENST00000542786 TDRD15B5MCY1 1934 aaKnown RBP14.7□□□□□ -0.06
LDB3-207ENST00000542786 EBAG9O00559 213 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 GCATO75600 419 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 ZBED1O96006 694 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 AMHP03971 560 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 MYCNP04198 464 aaPredicted RBP14.69□□□□□ -0.06
LDB3-207ENST00000542786 ODC1P11926 461 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 AMPD1P23109 780 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 PAX3P23760 479 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 BASP1P80723 227 aaKnown RBP14.69□□□□□ -0.06
LDB3-207ENST00000542786 SEMA3BQ13214 749 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 DPYSQ14117 519 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 INTS6LQ5JSJ4 861 aaKnown RBP14.69□□□□□ -0.06
LDB3-207ENST00000542786 C6orf89Q6UWU4 347 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 OR10T2Q8NGX3 314 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 CD99L2Q8TCZ2 262 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 LRRN4Q8WUT4 740 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 RSPH1Q8WYR4 309 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 MYLPFQ96A32 169 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 PGBD4Q96DM1 585 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 SMARCD1Q96GM5 515 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 CAPNS2Q96L46 248 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 UROC1Q96N76 676 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 ACBD6Q9BR61 282 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 ACSS3Q9H6R3 686 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 VPS37BQ9H9H4 285 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 PLAC1Q9HBJ0 212 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 POPDC2Q9HBU9 364 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 ANLNQ9NQW6 1124 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 TMLHEQ9NVH6 421 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 TEX264Q9Y6I9 313 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 PATJQ8NI35 1801 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 NLRC5Q86WI3 1866 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 SF3B1O75533 1304 aaKnown RBP eCLIP14.69□□□□□ -0.06
LDB3-207ENST00000542786 TOMM70O94826 608 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 C1QAP02745 245 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 ITGB1P05556 798 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 CKBP12277 381 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 SSTR1P30872 391 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 MAGEA3P43357 314 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 SCAPQ12770 1279 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 KCNT2Q6UVM3 1135 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 RNF180Q86T96 592 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 PDIK1LQ8N165 341 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 FBXO36Q8NEA4 188 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 RNF139Q8WU17 664 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 NTAN1Q96AB6 310 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 PGAP3Q96FM1 320 aaPredicted RBP14.69□□□□□ -0.06
LDB3-207ENST00000542786 CHMP6Q96FZ7 201 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 SUSD3Q96L08 255 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 SLC9A7Q96T83 725 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 RGS18Q9NS28 235 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 TBK1Q9UHD2 729 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 SLC24A2Q9UI40 661 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 STAP1Q9ULZ2 295 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 PTPRDP23468 1912 aa14.69□□□□□ -0.06
LDB3-207ENST00000542786 F8W810 466 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 M0QYT0 321 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 B3GAT3O94766 335 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 SKIP12755 728 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 VAV1P15498 845 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 FAM189BP81408 668 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 EFTUD2Q15029 972 aaKnown RBP eCLIP14.68□□□□□ -0.06
LDB3-207ENST00000542786 TMED2Q15363 201 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 BBS9Q3SYG4 887 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 PAN2Q504Q3 1202 aaKnown RBP14.68□□□□□ -0.06
LDB3-207ENST00000542786 LHX8Q68G74 356 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 PM20D1Q6GTS8 502 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 ZNF534Q76KX8 674 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 CTU1Q7Z7A3 348 aaKnown RBP14.68□□□□□ -0.06
LDB3-207ENST00000542786 LRRTM3Q86VH5 581 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 CAND1Q86VP6 1230 aaKnown RBP14.68□□□□□ -0.06
LDB3-207ENST00000542786 REM2Q8IYK8 340 aaPredicted RBP14.68□□□□□ -0.06
LDB3-207ENST00000542786 SCML4Q8N228 414 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 CCDC110Q8TBZ0 833 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 PYROXD1Q8WU10 500 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 MZB1Q8WU39 189 aa14.68□□□□□ -0.06
LDB3-207ENST00000542786 TRPV6Q9H1D0 765 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms