RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 C1orf54Q8WWF1 131 aa13.8□□□□□ -0.2
CHFR-221ENST00000542714 NTAN1Q96AB6 310 aa13.8□□□□□ -0.2
CHFR-221ENST00000542714 PNKPQ96T60 521 aa13.8□□□□□ -0.2
CHFR-221ENST00000542714 GDF15Q99988 308 aa13.8□□□□□ -0.2
CHFR-221ENST00000542714 ENTPD7Q9NQZ7 604 aa13.8□□□□□ -0.2
CHFR-221ENST00000542714 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHFR-221ENST00000542714 FBXW11Q9UKB1 542 aa13.8□□□□□ -0.2
CHFR-221ENST00000542714 NUDT5Q9UKK9 219 aa13.8□□□□□ -0.2
CHFR-221ENST00000542714 MTUS1Q9ULD2 1270 aa13.8□□□□□ -0.2
CHFR-221ENST00000542714 MAFFQ9ULX9 164 aa13.8□□□□□ -0.2
CHFR-221ENST00000542714 EFR3BQ9Y2G0 817 aa13.8□□□□□ -0.2
CHFR-221ENST00000542714 INSL5Q9Y5Q6 135 aa13.8□□□□□ -0.2
CHFR-221ENST00000542714 C2orf71A6NGG8 1288 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 BHMG1C9JSJ3 638 aaPredicted RBP13.79□□□□□ -0.2
CHFR-221ENST00000542714 MSI1O43347 362 aaKnown RBP13.79□□□□□ -0.2
CHFR-221ENST00000542714 RAD51CO43502 376 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 RB1P06400 928 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 SPATA31D3P0C874 917 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 CA8P35219 290 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 CETN2P41208 172 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 ERVK-21P61565 698 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 SCAPQ12770 1279 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 TWF1Q12792 350 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 KRT81Q14533 505 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 PDK2Q15119 407 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 C8orf74Q6P047 294 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 SPATA31D4Q6ZUB0 917 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 BBS12Q6ZW61 710 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 GPR161Q8N6U8 529 aaKnown RBP13.79□□□□□ -0.2
CHFR-221ENST00000542714 MRPL43Q8N983 215 aaKnown RBP13.79□□□□□ -0.2
CHFR-221ENST00000542714 MAIP1Q8WWC4 291 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 ATG4AQ8WYN0 398 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 FAF2Q96CS3 445 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 MYRFLQ96LU7 910 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 CALN1Q9BXU9 219 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 DCLK3Q9C098 648 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 SLITRK6Q9H5Y7 841 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 DHX35Q9H5Z1 703 aaKnown RBP13.79□□□□□ -0.2
CHFR-221ENST00000542714 TLR9Q9NR96 1032 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 TLR8Q9NR97 1041 aaKnown RBP13.79□□□□□ -0.2
CHFR-221ENST00000542714 CLIC5Q9NZA1 410 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.79□□□□□ -0.22e-7■■■■□ 26
CHFR-221ENST00000542714 SFMBT1Q9UHJ3 866 aa13.79□□□□□ -0.2
CHFR-221ENST00000542714 DMGDHQ9UI17 866 aaKnown RBP13.79□□□□□ -0.2
CHFR-221ENST00000542714 MAGED2Q9UNF1 606 aaPredicted RBP13.79□□□□□ -0.2
CHFR-221ENST00000542714 GOLGA6L10A0A0M3HER8 536 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 ZNF487B1APH4 448 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 DYNC1I1O14576 645 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 PRRG1O14668 218 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 CSPG5O95196 566 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 F9P00740 461 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 ADH1AP07327 375 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 CSH1P0DML2 217 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 CSH2P0DML3 217 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 RARGP13631 454 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 ADRA1BP35368 520 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 IRS1P35568 1242 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 COILP38432 576 aaPredicted RBP13.78□□□□□ -0.2
CHFR-221ENST00000542714 PTGIRP43119 386 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 ALDH1A3P47895 512 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 PSEN1P49768 467 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 SLC7A5Q01650 507 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 SEMA3BQ13214 749 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 KCTD19Q17RG1 926 aaPredicted RBP13.78□□□□□ -0.2
CHFR-221ENST00000542714 ODF2Q5BJF6 829 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 VSIG1Q86XK7 387 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 PSTKQ8IV42 348 aaKnown RBP13.78□□□□□ -0.2
CHFR-221ENST00000542714 PQLC3Q8N755 202 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 MAGOHBQ96A72 148 aaKnown RBP13.78□□□□□ -0.2
CHFR-221ENST00000542714 TRMT2BQ96GJ1 504 aaKnown RBP13.78□□□□□ -0.2
CHFR-221ENST00000542714 SAMD11Q96NU1 681 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 RNF157Q96PX1 679 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 TGS1Q96RS0 853 aaKnown RBP13.78□□□□□ -0.2
CHFR-221ENST00000542714 FAM118BQ9BPY3 351 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 ZNF670Q9BS34 389 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 PARD6BQ9BYG5 372 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 UBE2OQ9C0C9 1292 aaKnown RBP13.78□□□□□ -0.2
CHFR-221ENST00000542714 PLEKHA4Q9H4M7 779 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 LRRC19Q9H756 370 aa13.78□□□□□ -0.2
CHFR-221ENST00000542714 ZNF334Q9HCZ1 680 aaPredicted RBP13.78□□□□□ -0.2
CHFR-221ENST00000542714 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.78□□□□□ -0.2
CHFR-221ENST00000542714 TARSL2A2RTX5 802 aaKnown RBP13.77□□□□□ -0.21
CHFR-221ENST00000542714 FAM72CH0Y354 149 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 CST8O60676 142 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 TJP3O95049 919 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 CHRNA3P32297 505 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 GBP1P32455 592 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 ELF1P32519 619 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 DYNLT1P63172 113 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 PLD1Q13393 1074 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 CCNG2Q16589 344 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 GLE1Q53GS7 698 aaKnown RBP13.77□□□□□ -0.21
CHFR-221ENST00000542714 ANKRD20A8PQ5CZ79 823 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 PPP6R3Q5H9R7 873 aaPredicted RBP13.77□□□□□ -0.21
CHFR-221ENST00000542714 ARTNQ5T4W7 220 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 FAM72AQ5TYM5 149 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 SNX30Q5VWJ9 437 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 FAM72DQ6L9T8 149 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 FAM72BQ86X60 149 aa13.77□□□□□ -0.21
CHFR-221ENST00000542714 RFX6Q8HWS3 928 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms