RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 TKTL1P51854 596 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 CETN1Q12798 172 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 EFEMP1Q12805 493 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 MAP7D1Q3KQU3 841 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 EGFLAMQ63HQ2 1017 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 TTI2Q6NXR4 508 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 RSRC2Q7L4I2 434 aaKnown RBP16.39■□□□□ 0.21
VPS33A-206ENST00000542310 LPCAT2Q7L5N7 544 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 FAM217AQ8IXS0 508 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 CPXM2Q8N436 756 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 NT5C1BQ96P26 610 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 GABRG3Q99928 467 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 EDEM2Q9BV94 578 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 RXFP3Q9NSD7 469 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 MARCH2Q9P0N8 246 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 HCN2Q9UL51 889 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 SLC27A6Q9Y2P4 619 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 PI4KAP42356 2102 aa16.39■□□□□ 0.21
VPS33A-206ENST00000542310 O00370 1275 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 TM4SF5O14894 197 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 NPC1O15118 1278 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 TRIM24O15164 1050 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 KLKB1P03952 638 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 CISD3P0C7P0 127 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 HOXD12P35452 270 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 PDE4CQ08493 712 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 E2F5Q15329 346 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 CCDC40Q4G0X9 1142 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 FYB2Q5VWT5 728 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 RNF43Q68DV7 783 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 SDE2Q6IQ49 451 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 BHLHA9Q7RTU4 235 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 KCTD13Q8WZ19 329 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 ULBP1Q9BZM6 244 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 SMOC1Q9H4F8 434 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 LRRC4Q9HBW1 653 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 CD248Q9HCU0 757 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 ZDHHC4Q9NPG8 344 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 CNGB3Q9NQW8 809 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 EVLQ9UI08 416 aaPredicted RBP16.38■□□□□ 0.21
VPS33A-206ENST00000542310 INVSQ9Y283 1065 aa16.38■□□□□ 0.21
VPS33A-206ENST00000542310 A0A1W2PQF6 199 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 LNP1A1A4G5 178 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 PRRT4C9JH25 899 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 KHNYNO15037 678 aaKnown RBP16.37■□□□□ 0.21
VPS33A-206ENST00000542310 CYBBP04839 570 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 CD19P15391 556 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 CD44P16070 742 aaKnown RBP16.37■□□□□ 0.21
VPS33A-206ENST00000542310 GABRG2P18507 467 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 ZNF132P52740 706 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 MARSP56192 900 aaKnown RBP16.37■□□□□ 0.21
VPS33A-206ENST00000542310 ZNF445P59923 1031 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 ADIGQ0VDE8 80 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 MORC3Q14149 939 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 STILQ15468 1287 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 PKDCCQ504Y2 493 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 PEAR1Q5VY43 1037 aaPredicted RBP16.37■□□□□ 0.21
VPS33A-206ENST00000542310 TCEAL6Q6IPX3 200 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 LCLAT1Q6UWP7 414 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 SLC36A4Q6YBV0 504 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 TOGARAM2Q6ZUX3 1019 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 CHPFQ8IZ52 775 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 SIX6OS1Q8N1H7 587 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 TCEAL3Q969E4 200 aa16.37■□□□□ 0.21
VPS33A-206ENST00000542310 IPO9Q96P70 1041 aaKnown RBP16.37■□□□□ 0.21
VPS33A-206ENST00000542310 AGO1Q9UL18 857 aaKnown RBP16.37■□□□□ 0.21
VPS33A-206ENST00000542310 HBS1LQ9Y450 684 aaKnown RBP16.37■□□□□ 0.21
VPS33A-206ENST00000542310 MUC22E2RYF6 1773 aaPredicted RBP16.36■□□□□ 0.21
VPS33A-206ENST00000542310 TULP2O00295 520 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 ZBTB24O43167 697 aaPredicted RBP16.36■□□□□ 0.21
VPS33A-206ENST00000542310 AP5Z1O43299 807 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 ZNF217O75362 1048 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 LATS1O95835 1130 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 GNA14O95837 355 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 DHPSP49366 369 aaPredicted RBP16.36■□□□□ 0.21
VPS33A-206ENST00000542310 MFAP3P55082 362 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 GCNT1Q02742 428 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 EIF4HQ15056 248 aaKnown RBP16.36■□□□□ 0.21
VPS33A-206ENST00000542310 TRIP4Q15650 581 aaPredicted RBP16.36■□□□□ 0.21
VPS33A-206ENST00000542310 PGBD3Q8N328 593 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 IPO4Q8TEX9 1081 aaKnown RBP16.36■□□□□ 0.21
VPS33A-206ENST00000542310 NELFBQ8WX92 580 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 RLN3Q8WXF3 142 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 LSM14BQ9BX40 385 aaKnown RBP16.36■□□□□ 0.21
VPS33A-206ENST00000542310 CALCOCO1Q9P1Z2 691 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 MBD1Q9UIS9 605 aaPredicted RBP16.36■□□□□ 0.21
VPS33A-206ENST00000542310 CIZ1Q9ULV3 898 aaPredicted RBP16.36■□□□□ 0.21
VPS33A-206ENST00000542310 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.36■□□□□ 0.21
VPS33A-206ENST00000542310 CTNND2Q9UQB3 1225 aa16.36■□□□□ 0.21
VPS33A-206ENST00000542310 SLC12A8A0AV02 714 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 PPP1R3GB7ZBB8 358 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 MAP3K13O43283 966 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 HMBSP08397 361 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 BMP6P22004 513 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 LRMPQ12912 555 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 PAK1Q13153 545 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 LYSMD4Q5XG99 296 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 KLHL10Q6JEL2 608 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 MSANTD2Q6P1R3 559 aa16.35■□□□□ 0.21
VPS33A-206ENST00000542310 TMEM270Q6UE05 265 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms