RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 MDM1Q8TC05 714 aa17.93■□□□□ 0.46
TMEM50B-210ENST00000542230 WDR83Q9BRX9 315 aaKnown RBP17.93■□□□□ 0.46
TMEM50B-210ENST00000542230 CSNK1G1Q9HCP0 422 aa17.93■□□□□ 0.46
TMEM50B-210ENST00000542230 SCN5AQ14524 2016 aa17.92■□□□□ 0.46
TMEM50B-210ENST00000542230 CAPN9O14815 690 aa17.92■□□□□ 0.46
TMEM50B-210ENST00000542230 INPPL1O15357 1258 aa17.92■□□□□ 0.46
TMEM50B-210ENST00000542230 KCNN4O15554 427 aa17.92■□□□□ 0.46
TMEM50B-210ENST00000542230 AUHQ13825 339 aaKnown RBP17.92■□□□□ 0.46
TMEM50B-210ENST00000542230 LRRC31Q6UY01 552 aa17.92■□□□□ 0.46
TMEM50B-210ENST00000542230 TLCD1Q96CP7 247 aa17.92■□□□□ 0.46
TMEM50B-210ENST00000542230 WDR6Q9NNW5 1121 aaKnown RBP17.92■□□□□ 0.46
TMEM50B-210ENST00000542230 CREB3O43889 395 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 SHOX2O60902 331 aaPredicted RBP17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 CCL23P55773 120 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 BASP1P80723 227 aaKnown RBP17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 SKOR1P84550 965 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 DEUP1Q05D60 604 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 MORF4L2Q15014 288 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 NAT8LQ8N9F0 302 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 BBOF1Q8ND07 529 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 CCHCR1Q8TD31 782 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 MRPL42Q9Y6G3 142 aaKnown RBP17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 NT5C1B-RDH14C9J2C7 533 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 RASGRF2O14827 1237 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 CREB1P16220 341 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 YWHAHQ04917 246 aaPredicted RBP17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 AGBL2Q5U5Z8 902 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 NCBP2-AS2Q69YL0 99 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 ZBED8Q8IZ13 594 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 CNGB3Q9NQW8 809 aa17.91■□□□□ 0.46
TMEM50B-210ENST00000542230 F5H423 210 aaPredicted RBP17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 LTFP02788 710 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 DESP17661 470 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 RDXP35241 583 aaKnown RBP17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 GPR15P49685 360 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 PDIA2Q13087 525 aaKnown RBP17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 SLC39A12Q504Y0 691 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 CYP4X1Q8N118 509 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 CCDC110Q8TBZ0 833 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 UROC1Q96N76 676 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 FRMD8P1Q9BZ68 369 aaPredicted RBP17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 ARHGEF4Q9NR80 690 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 DTLQ9NZJ0 730 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 NUDT5Q9UKK9 219 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 MYO18AQ92614 2054 aaKnown RBP17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 AVILO75366 819 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 PLEKHG4Q58EX7 1191 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 CEP57Q86XR8 500 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 TTC9BQ8N6N2 239 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 PGLYRP2Q96PD5 576 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 LGMNQ99538 433 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 RNF208Q9H0X6 261 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 PAK6Q9NQU5 681 aaPredicted RBP17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 DDIT4Q9NX09 232 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 TBK1Q9UHD2 729 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 SLC12A6Q9UHW9 1150 aa17.9■□□□□ 0.46
TMEM50B-210ENST00000542230 NLRC5Q86WI3 1866 aa17.89■□□□□ 0.46
TMEM50B-210ENST00000542230 DNM1LO00429 736 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 RGS16O15492 202 aaPredicted RBP17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 TGM2P21980 687 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 GLIPR1L2Q4G1C9 344 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 BSPRYQ5W0U4 402 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 KCNT2Q6UVM3 1135 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 TMEM173Q86WV6 379 aaPredicted RBP17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 PPIL6Q8IXY8 311 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 GPR152Q8TDT2 470 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 GPR62Q9BZJ7 368 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 PPP1R12CQ9BZL4 782 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 DMAP1Q9NPF5 467 aaPredicted RBP17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 VWA8A3KMH1 1905 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 MFSD11O43934 449 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 FBXO21O94952 628 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 EMC10Q5UCC4 262 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 HOOK3Q86VS8 718 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 IGDCC3Q8IVU1 814 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 RNF139Q8WU17 664 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 PGM2Q96G03 612 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 CEP41Q9BYV8 373 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 TMEM161AQ9NX61 479 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 ABI2Q9NYB9 513 aaPredicted RBP17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 XPO7Q9UIA9 1087 aaKnown RBP17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 DSEQ9UL01 958 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 STAP1Q9ULZ2 295 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 PCDHB8Q9UN66 801 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 SHOC2Q9UQ13 582 aa17.89■□□□□ 0.45
TMEM50B-210ENST00000542230 SOAT2O75908 522 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 ADRA1BP35368 520 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 ACTN2P35609 894 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 GRIK1P39086 918 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 TSPY1Q01534 308 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 THEM5Q8N1Q8 247 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 AGGF1Q8N302 714 aaeCLIP17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 URGCPQ8TCY9 931 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 MRRFQ96E11 262 aaKnown RBP17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 CASD1Q96PB1 797 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 TMEM109Q9BVC6 243 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 RAB6BQ9NRW1 208 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 PTPRDP23468 1912 aa17.88■□□□□ 0.45
TMEM50B-210ENST00000542230 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms