RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 TCRBV7S3A2A0A539 114 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 SOWAHBA6NEL2 793 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 C2CD2LO14523 706 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 DCXO43602 365 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 HCRTO43612 131 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 THPOP40225 353 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 ZNF157P51786 506 aaPredicted RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 LRRC8EQ6NSJ5 796 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 ZNF572Q7Z3I7 529 aaPredicted RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 RAB44Q7Z6P3 723 aaPredicted RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 CMC1Q7Z7K0 106 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 NLGN2Q8NFZ4 835 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 OR52K1Q8NGK4 314 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 HTR3CQ8WXA8 447 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 LPPQ93052 612 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 TLCD1Q96CP7 247 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 NAF1Q96HR8 494 aaKnown RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 MARK4Q96L34 752 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 SERPINI1Q99574 410 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
VARS2-212ENST00000542001 ADARB2Q9NS39 739 aaKnown RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 AFF4Q9UHB7 1163 aaKnown RBP16.61■□□□□ 0.25
VARS2-212ENST00000542001 GAS2O43903 313 aaKnown RBP16.6■□□□□ 0.25
VARS2-212ENST00000542001 NOL3O60936 208 aaKnown RBP16.6■□□□□ 0.25
VARS2-212ENST00000542001 TRUB2O95900 331 aaKnown RBP16.6■□□□□ 0.25
VARS2-212ENST00000542001 CSE1LP55060 971 aaKnown RBP16.6■□□□□ 0.25
VARS2-212ENST00000542001 ANKRD20A2Q5SQ80 823 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 C1orf220Q5T0J3 134 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 ANKRD20A1Q5TYW2 823 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 WSCD1Q658N2 575 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 PYROXD2Q8N2H3 581 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 TUBGCP4Q9UGJ1 667 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 RALBP11234 206 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 SLC6A3Q01959 620 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 OGDHQ02218 1023 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 BBS12Q6ZW61 710 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 ZDHHC14Q8IZN3 488 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 TRIML2Q8N7C3 387 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 CPT1BQ92523 772 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 PHF21BQ96EK2 531 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 RNF157Q96PX1 679 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 SEPT5Q99719 369 aaPredicted RBP16.6■□□□□ 0.25
VARS2-212ENST00000542001 RNF103-CHMP3A0A140T963 221 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 PTPN4P29074 926 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 PDK2Q15119 407 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 PIGZQ86VD9 579 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 CEP70Q8NHQ1 597 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 PRDM12Q9H4Q4 367 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 Q9H521 79 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 ETNK2Q9NVF9 386 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 SLC17A6Q9P2U8 582 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 H0YGN5 161 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 ARIH2O95376 493 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 GHRP10912 638 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 IL1R2P27930 398 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 EPHX2P34913 555 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 CDKN2BP42772 138 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 YWHAZP63104 245 aaKnown RBP16.6■□□□□ 0.25
VARS2-212ENST00000542001 SLC25A3Q00325 362 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 SV2CQ496J9 727 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 SNX30Q5VWJ9 437 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 ULBP1Q9BZM6 244 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 NFS1Q9Y697 457 aa16.6■□□□□ 0.25
VARS2-212ENST00000542001 KRT36O76013 467 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 SERPINB9P50453 376 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 OAZ1P54368 228 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 WDR4P57081 412 aaKnown RBP16.59■□□□□ 0.25
VARS2-212ENST00000542001 SPRED3Q2MJR0 410 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 PMF1Q6P1K2 205 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 ABTB1Q969K4 478 aaPredicted RBP16.59■□□□□ 0.25
VARS2-212ENST00000542001 ZFP42Q96MM3 310 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 APBA2Q99767 749 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 DDX50Q9BQ39 737 aaKnown RBP16.59■□□□□ 0.25
VARS2-212ENST00000542001 ZNF395Q9H8N7 513 aaPredicted RBP16.59■□□□□ 0.25
VARS2-212ENST00000542001 ARHGEF38Q9NXL2 777 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 RUVBL2Q9Y230 463 aaKnown RBP16.59■□□□□ 0.25
VARS2-212ENST00000542001 GOLGB1Q14789 3259 aaKnown RBP16.59■□□□□ 0.25
VARS2-212ENST00000542001 KIF3CO14782 793 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 SPAG6O75602 509 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 UNC5CO95185 931 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 PAMP19021 973 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 TFE3P19532 575 aaPredicted RBP16.59■□□□□ 0.25
VARS2-212ENST00000542001 RIOX2Q8IUF8 465 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 BLOC1S5Q8TDH9 187 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 PYDC1Q8WXC3 89 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 CENPTQ96BT3 561 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 CLPTM1LQ96KA5 538 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 TMEM134Q9H6X4 195 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 PRDM5Q9NQX1 630 aaPredicted RBP16.59■□□□□ 0.25
VARS2-212ENST00000542001 GEMIN8Q9NWZ8 242 aaKnown RBP16.59■□□□□ 0.25
VARS2-212ENST00000542001 C15orf41Q9Y2V0 281 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 BST2Q10589 180 aaKnown RBP16.59■□□□□ 0.25
VARS2-212ENST00000542001 VSTM1Q6UX27 236 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 SCUBE1Q8IWY4 988 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 DEFB107AQ8IZN7 70 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 CLEC4CQ8WTT0 213 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 OXNAD1Q96HP4 312 aaPredicted RBP16.59■□□□□ 0.25
VARS2-212ENST00000542001 CYP3A43Q9HB55 503 aa16.59■□□□□ 0.25
VARS2-212ENST00000542001 SDK1Q7Z5N4 2213 aa16.58■□□□□ 0.25
VARS2-212ENST00000542001 APOEP02649 317 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms