RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 RRP15Q9Y3B9 282 aaKnown RBP8.09□□□□□ -1.11
AC005840.3-201ENST00000541888 CDY1Q9Y6F8 540 aa8.09□□□□□ -1.11
AC005840.3-201ENST00000541888 ZSCAN5CA6NGD5 496 aaPredicted RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 YJEFN3A6XGL0 299 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 E7ENQ6 273 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 PROSCO94903 275 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 VNN2O95498 520 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 FGGP02679 453 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 AMHP03971 560 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 CYP11A1P05108 521 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 CD48P09326 243 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 KRT10P13645 584 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 MAGEA9P43362 315 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 GTF2A1P52655 376 aaPredicted RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 MTMR3Q13615 1198 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 BRD3Q15059 726 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 C9orf50Q5SZB4 431 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 CCDC181Q5TID7 509 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 SYPL2Q5VXT5 272 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 KAZNQ674X7 775 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 C11orf63Q6NUN7 778 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 SCYL2Q6P3W7 929 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 KCNT2Q6UVM3 1135 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 CCDC50Q8IVM0 306 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 KLHL7Q8IXQ5 586 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 ZDHHC14Q8IZN3 488 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 NETO2Q8NC67 525 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 HDAC7Q8WUI4 952 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 RXFP2Q8WXD0 754 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 RIN2Q8WYP3 895 aaPredicted RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 HAUS1Q96CS2 278 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 ZNF689Q96CS4 500 aaPredicted RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 MCRS1Q96EZ8 462 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 FAXDC2Q96IV6 333 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 RNPC3Q96LT9 517 aaKnown RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 MYCBPQ99417 103 aaPredicted RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 ULBP1Q9BZM6 244 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 TSPAN10Q9H1Z9 355 aaPredicted RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 RC3H2Q9HBD1 1191 aaKnown RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 ARFGAP3Q9NP61 516 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 NGRNQ9NPE2 291 aaKnown RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 HCN2Q9UL51 889 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 CDH9Q9ULB4 789 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 ZNF232Q9UNY5 417 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 BPTFQ12830 3046 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 ABHD14A-ACY1A0A1B0GW23 586 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 SERTM1A2A2V5 107 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 CCDC151A5D8V7 595 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 HHLA1C9JL84 531 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 OIP5O43482 229 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 LRCH4O75427 683 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 MTA2O94776 668 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 FGBP02675 491 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 MYBL1P10243 752 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 BMP4P12644 408 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 PDGFRAP16234 1089 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 PCSK1P29120 753 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 GRIK1P39086 918 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 GABRB2P47870 512 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 PEX5P50542 639 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 PLXNA3P51805 1871 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 HADHBP55084 474 aaKnown RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 ADCY1Q08828 1119 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 IFI16Q16666 785 aaKnown RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 CCDC14Q49A88 953 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 TTC31Q49AM3 519 aaPredicted RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 TMEM240Q5SV17 173 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 FAM171BQ6P995 826 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 SPATA2LQ8IUW3 424 aaPredicted RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 GSPT2Q8IYD1 628 aaKnown RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 SYCE1Q8N0S2 351 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 CCDC33Q8N5R6 958 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 TSEN2Q8NCE0 465 aaKnown RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 ATG4AQ8WYN0 398 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 HSPH1Q92598 858 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 TRIM11Q96F44 468 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 IGSF21Q96ID5 467 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 VCPIP1Q96JH7 1222 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 SEPT5Q99719 369 aaPredicted RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 NCAPGQ9BPX3 1015 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 ACBD6Q9BR61 282 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 CERS4Q9HA82 394 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 MRPL47Q9HD33 250 aaKnown RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 ALG13Q9NP73 1137 aaKnown RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 SAE1Q9UBE0 346 aaPredicted RBP8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 NAALADL1Q9UQQ1 740 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 SCINQ9Y6U3 715 aa8.08□□□□□ -1.12
AC005840.3-201ENST00000541888 ATP8B3O60423 1300 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 SF3B1O75533 1304 aaKnown RBP eCLIP8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 WDR27A2RRH5 827 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 C2CD4BA6NLJ0 364 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 SIGLEC16A6NMB1 481 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 XPO1O14980 1071 aaKnown RBP8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 POLR3GO15318 223 aaPredicted RBP8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 MAP3K6O95382 1288 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 CPP00450 1065 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 OR1D2P34982 312 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 CTNNA1P35221 906 aaKnown RBP8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 NUMBP49757 651 aa8.07□□□□□ -1.12
AC005840.3-201ENST00000541888 DYNLT1P63172 113 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms