RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 RASSF1Q9NS23 344 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 ADARB2Q9NS39 739 aaKnown RBP4.78□□□□□ -1.64
SNHG1-217ENST00000541578 ASB6Q9NWX5 421 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 BCCIPQ9P287 314 aaKnown RBP eCLIP4.78□□□□□ -1.64
SNHG1-217ENST00000541578 GJD2Q9UKL4 321 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 ZMYND8Q9ULU4 1186 aaPredicted RBP4.78□□□□□ -1.64
SNHG1-217ENST00000541578 AFG3L2Q9Y4W6 797 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 ENTPD2Q9Y5L3 495 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 AKNAQ7Z591 1439 aa4.78□□□□□ -1.64
SNHG1-217ENST00000541578 DISP1Q96F81 1524 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 ADGRA2Q96PE1 1338 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 MAGI2Q86UL8 1455 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 CCDC196A0A1B0GTZ2 297 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 H7C4K7 107 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 CCP110O43303 1012 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 SNX2O60749 519 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 TOM1O60784 492 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 PIAS2O75928 621 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 C1QL1O75973 258 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 ACTL6BO94805 426 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 GLP2RO95838 553 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 A1BGP04217 495 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 IFIT1P09914 478 aaKnown RBP4.77□□□□□ -1.65
SNHG1-217ENST00000541578 NPPBP16860 134 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 EGR1P18146 543 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 GABRB3P28472 473 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 CD6P30203 668 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 VIPR2P41587 438 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 GCLCP48506 637 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-217ENST00000541578 PTDSS1P48651 473 aaKnown RBP4.77□□□□□ -1.65
SNHG1-217ENST00000541578 PRKAG1P54619 331 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 NAP1L1P55209 391 aaKnown RBP4.77□□□□□ -1.65
SNHG1-217ENST00000541578 WNT3P56703 355 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 AP2B1P63010 937 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 NSUN2Q08J23 767 aaKnown RBP eCLIP4.77□□□□□ -1.65
SNHG1-217ENST00000541578 IQCB1Q15051 598 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 RPS6KA2Q15349 733 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 TXNRD1Q16881 649 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 RBM20Q5T481 1227 aaKnown RBP4.77□□□□□ -1.65
SNHG1-217ENST00000541578 FAM180BQ6P0A1 224 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 USP49Q70CQ1 688 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 MOGAT3Q86VF5 341 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 LRRTM4Q86VH4 590 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 RASGRP3Q8IV61 690 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 GOLGA1Q92805 767 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 EID2BQ96D98 161 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 NELL2Q99435 816 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 TIMP4Q99727 224 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 ACTRT3Q9BYD9 372 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 INO80BQ9C086 356 aaPredicted RBP4.77□□□□□ -1.65
SNHG1-217ENST00000541578 CPNE5Q9HCH3 593 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 HELLSQ9NRZ9 838 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 IGSF9Q9P2J2 1179 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 TMEM98Q9Y2Y6 226 aa4.77□□□□□ -1.65
SNHG1-217ENST00000541578 RAPGEF2Q9Y4G8 1499 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 WDR27A2RRH5 827 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 LRRC3CA6NJW4 275 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 VWC2LB2RUY7 222 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 PROP1O75360 226 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 RNASEH2AO75792 299 aaKnown RBP4.76□□□□□ -1.65
SNHG1-217ENST00000541578 VIPP01282 170 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 ATXN1LP0C7T5 689 aaKnown RBP4.76□□□□□ -1.65
SNHG1-217ENST00000541578 RXRAP19793 462 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 GPD1P21695 349 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 AKT1P31749 480 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 ATICP31939 592 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 TOB1P50616 345 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-217ENST00000541578 SOX10P56693 466 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 NHLH1Q02575 133 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 MAPK7Q13164 816 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 SLC12A1Q13621 1099 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 TSTD2Q5T7W7 516 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 VPS53Q5VIR6 699 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 UHRF1BP1Q6BDS2 1440 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 PLAG1Q6DJT9 500 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 TTLL5Q6EMB2 1281 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 TANGO2Q6ICL3 276 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 KRBA2Q6ZNG9 492 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 RAB11FIP2Q7L804 512 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 CCDC28AQ8IWP9 274 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 NRSN1Q8IZ57 195 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 SPARTQ8N0X7 666 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 SPPL3Q8TCT6 385 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 OTUD7AQ8TE49 926 aaPredicted RBP4.76□□□□□ -1.65
SNHG1-217ENST00000541578 VOPP1Q96AW1 172 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 FKBP10Q96AY3 582 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 C3orf49Q96BT1 292 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 FAM136AQ96C01 138 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 HAPLN3Q96S86 360 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 RTKNQ9BST9 563 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 ALG8Q9BVK2 526 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 CFAP74Q9C0B2 1584 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 DHX36Q9H2U1 1008 aaKnown RBP4.76□□□□□ -1.65
SNHG1-217ENST00000541578 FAM83DQ9H4H8 585 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 ZBTB26Q9HCK0 441 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 UBN1Q9NPG3 1134 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 CA14Q9ULX7 337 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 ST3GAL5Q9UNP4 418 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 FER1L4A9Z1Z3 1794 aa4.76□□□□□ -1.65
SNHG1-217ENST00000541578 ABCA9Q8IUA7 1624 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms