RNA–Protein interactions for RNA: ENST00000541461.5

PHACTR3-209, Transcript of phosphatase and actin regulator 3, humanhuman

TSL 2 BASIC

Gene PHACTR3, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3-209ENST00000541461 SIRPGQ9P1W8 387 aa10.92□□□□□ -0.66
PHACTR3-209ENST00000541461 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 CHADO15335 359 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 KCNN4O15554 427 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 KRT19P08727 400 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 SRGAP2CP0DJJ0 459 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 CSH1P0DML2 217 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 CSH2P0DML3 217 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 TM4SF4P48230 202 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 CNTN2Q02246 1040 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 TAF1CQ15572 869 aaPredicted RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 TRMT5Q32P41 509 aaKnown RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 CRLF3Q8IUI8 442 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 EXOC8Q8IYI6 725 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 PRPF31Q8WWY3 499 aaKnown RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 CDHR1Q96JP9 859 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 GBP5Q96PP8 586 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 TUBGCP5Q96RT8 1024 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 ECSITQ9BQ95 431 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 TRIM4Q9C037 500 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 ACAD9Q9H845 621 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 NDE1Q9NXR1 346 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 HMGXB4Q9UGU5 601 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 HMX2A2RU54 273 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 MSCO60682 206 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 PGK2P07205 417 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 HOXC6P09630 235 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 C6orf222P0C671 652 aaPredicted RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 RBL1P28749 1068 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 VEGFBP49765 207 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 AP2B1P63010 937 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 DSG1Q02413 1049 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 C15orf59Q2T9L4 293 aaPredicted RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 C6orf163Q5TEZ5 329 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 TRMT10BQ6PF06 316 aaKnown RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 MTHFD1LQ6UB35 978 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 CYP4V2Q6ZWL3 525 aaPredicted RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 CDR2LQ86X02 465 aaPredicted RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 RIOX2Q8IUF8 465 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 TRIM42Q8IWZ5 723 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 NDUFAF2Q8N183 169 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 GSTCDQ8NEC7 633 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 ZFAND2BQ8WV99 257 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 KCNN1Q92952 543 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 MTBPQ96DY7 904 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 ZNF668Q96K58 619 aaPredicted RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 NR1H4Q96RI1 486 aaPredicted RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 TWNKQ96RR1 684 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 MMP19Q99542 508 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 SDCBP2Q9H190 292 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 CPSF2Q9P2I0 782 aaKnown RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 PDP2Q9P2J9 529 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 HBS1LQ9Y450 684 aaKnown RBP10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 HEY1Q9Y5J3 304 aa10.91□□□□□ -0.66
PHACTR3-209ENST00000541461 DOCK3Q8IZD9 2030 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 MED7O43513 233 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 SNNO75324 88 aaPredicted RBP10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 TOM1L1O75674 476 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 BPGMP07738 259 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 APRTP07741 180 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 PRKCHP24723 683 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 CCNFP41002 786 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 SLC25A3Q00325 362 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 GSTA3Q16772 222 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 CDO1Q16878 200 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 FAM102AQ5T9C2 384 aaPredicted RBP10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 TRNP1Q6NT89 227 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 ZPBP2Q6X784 338 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 UNC5AQ6ZN44 842 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 RAPH1Q70E73 1250 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 DPH6Q7L8W6 267 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 ACO2Q99798 780 aaKnown RBP10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 ADPGKQ9BRR6 497 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 APOL6Q9BWW8 343 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 NIFKQ9BYG3 293 aaKnown RBP10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 GPATCH2LQ9NWQ4 482 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 ETAA1Q9NY74 926 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 ZNF180Q9UJW8 692 aa10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 CPSF3Q9UKF6 684 aaKnown RBP10.9□□□□□ -0.66
PHACTR3-209ENST00000541461 LCTP09848 1927 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 A0A088AWK7 358 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 ANKRD33BA6NCL7 494 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 SLC15A5A6NIM6 579 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 OGTO15294 1046 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 LYPLA1O75608 230 aaPredicted RBP10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 GRAP2O75791 330 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 MICAL2O94851 1124 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 SORBS2O94875 1100 aaKnown RBP10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 ENDOD1O94919 500 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 APOEP02649 317 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 CPOXP36551 454 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 PDE1BQ01064 536 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 CDC16Q13042 620 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 STX3Q13277 289 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 LRRC36Q1X8D7 754 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 DNAL1Q4LDG9 190 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 LGSNQ5TDP6 509 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 MPP5Q8N3R9 675 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 POU5F2Q8N7G0 328 aa10.9□□□□□ -0.67
PHACTR3-209ENST00000541461 PLD5Q8N7P1 536 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms