RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 DLDP09622 509 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 GSTT2P0CG29 244 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 GSTT2BP0CG30 244 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ETS1P14921 441 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ATP6V1B1P15313 513 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 BGNP21810 368 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 PHKA2P46019 1235 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ACOT2P49753 483 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ADARP55265 1226 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 OXCT1P55809 520 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 TAS2R40P59535 323 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ASPHQ12797 758 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 SLC12A1Q13621 1099 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 SEPT6Q14141 434 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 HIF1AQ16665 826 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 CCDC157Q569K6 752 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 RNASEH2BQ5TBB1 312 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 TMCO4Q5TGY1 634 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 KRT39Q6A163 491 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 TMEM270Q6UE05 265 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ARMCX2Q7L311 632 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ALYREFQ86V81 257 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 C12orf56Q8IXR9 622 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 MCPH1Q8NEM0 835 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 HELQQ8TDG4 1101 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 LZICQ8WZA0 190 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 DHX38Q92620 1227 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 LENG1Q96BZ8 264 aaPredicted RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 SCYL1Q96KG9 808 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 CEP295NLQ96MC4 621 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 GCNAQ96QF7 691 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 PPARGC1AQ9UBK2 798 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 TAGLN3Q9UI15 199 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 RABGEF1Q9UJ41 708 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 TBC1D30Q9Y2I9 924 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 PCDHA10Q9Y5I2 948 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 SPO11Q9Y5K1 396 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 GOLGA8MH3BSY2 632 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 I3L4J1 428 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 SGK1O00141 431 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 BANF1O75531 89 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 CDK4P11802 303 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 YBX3P16989 372 aaKnown RBP eCLIP5.41□□□□□ -1.54
PROM1-220ENST00000540805 ITGB5P18084 799 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 GLRA2P23416 452 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 STT3AP46977 705 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 GPX6P59796 221 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 MCCD1P59942 119 aaPredicted RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 KRT76Q01546 638 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 HNRNPDQ14103 355 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 PAN2Q504Q3 1202 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 LPCAT4Q643R3 524 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 PLA2G4FQ68DD2 849 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 KLHL35Q6PF15 583 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 RAPH1Q70E73 1250 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 PDZD4Q76G19 769 aaPredicted RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 PGBD3Q8N328 593 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 HIPK4Q8NE63 616 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 IL31RAQ8NI17 732 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 SEMA4DQ92854 862 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 APOPT1Q96IL0 206 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 RILPQ96NA2 401 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 FAM111AQ96PZ2 611 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 ACSS3Q9H6R3 686 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 GBA2Q9HCG7 927 aaPredicted RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 TBC1D22BQ9NU19 505 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 TSR3Q9UJK0 312 aaKnown RBP5.41□□□□□ -1.54
PROM1-220ENST00000540805 PPM1HQ9ULR3 514 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 GMEB1Q9Y692 573 aa5.41□□□□□ -1.54
PROM1-220ENST00000540805 CLUHO75153 1309 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 BPTFQ12830 3046 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 USP34Q70CQ2 3546 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 IQANK1A0A1B0GTG1 560 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 FAM237BA0A1B0GVD1 139 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 TMEM247A6NEH6 219 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 KBTBD13C9JR72 458 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 ATP9BO43861 1147 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 GMNNO75496 209 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 IL1BP01584 269 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 KRT1P04264 644 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 ADRB2P07550 413 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 UNGP13051 313 aaPredicted RBP5.4□□□□□ -1.54
PROM1-220ENST00000540805 ADORA2BP29275 332 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 SSTR1P30872 391 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 ARL4AP40617 200 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 RGS2P41220 211 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 TPD52P55327 224 aaPredicted RBP5.4□□□□□ -1.54
PROM1-220ENST00000540805 BASP1P80723 227 aaKnown RBP5.4□□□□□ -1.54
PROM1-220ENST00000540805 PDE1BQ01064 536 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 TSPY1Q01534 308 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 KDSRQ06136 332 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 CCDC142Q17RM4 750 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 LLGL2Q6P1M3 1020 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 AAGABQ6PD74 315 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 DRICH1Q6PGQ1 229 aaPredicted RBP5.4□□□□□ -1.54
PROM1-220ENST00000540805 SLC2A7Q6PXP3 512 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 ADGRG6Q86SQ4 1221 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 DHDDSQ86SQ9 333 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 PDSS2Q86YH6 399 aa5.4□□□□□ -1.54
PROM1-220ENST00000540805 GPRC5AQ8NFJ5 357 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms