RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 CCNG2Q16589 344 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 TFDP3Q5H9I0 405 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 OLFML2BQ68BL8 750 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 SLC27A1Q6PCB7 646 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 MON1BQ7L1V2 547 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 PRELID2Q8N945 189 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 TCP10LQ8TDR4 215 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 PDCD6IPQ8WUM4 868 aaKnown RBP10.32□□□□□ -0.76
TRAF1-202ENST00000540010 C20orf96Q9NUD7 363 aaPredicted RBP10.32□□□□□ -0.76
TRAF1-202ENST00000540010 NINJ2Q9NZG7 142 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 PAK5Q9P286 719 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 WDR35Q9P2L0 1181 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 SAE1Q9UBE0 346 aaPredicted RBP10.32□□□□□ -0.76
TRAF1-202ENST00000540010 SUN2Q9UH99 717 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 TMEM59LQ9UK28 342 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 ARID2Q68CP9 1835 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 A0A0G2JMZ2 1700 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 ARHGAP10A1A4S6 786 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 C17orf102A2RUQ5 167 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 O00370 1275 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 GHRP10912 638 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 MAMLD1Q13495 774 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 AUHQ13825 339 aaKnown RBP10.32□□□□□ -0.76
TRAF1-202ENST00000540010 FAM187BQ17R55 369 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 SLC10A6Q3KNW5 377 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 EFHC2Q5JST6 749 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 SCN4BQ8IWT1 228 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 ARHGAP18Q8N392 663 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 FAM193BQ96PV7 902 aaPredicted RBP10.32□□□□□ -0.76
TRAF1-202ENST00000540010 TASP1Q9H6P5 420 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 SARS2Q9NP81 518 aaKnown RBP10.32□□□□□ -0.76
TRAF1-202ENST00000540010 KLK14Q9P0G3 267 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 SCN4AP35499 1836 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 ABLIM1O14639 778 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 PFDN6O15212 129 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 FAM189A1O60320 539 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 TPST1O60507 370 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 FSCN1Q16658 493 aaKnown RBP10.32□□□□□ -0.76
TRAF1-202ENST00000540010 MFSD7Q6UXD7 560 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 PHF13Q86YI8 300 aaPredicted RBP10.32□□□□□ -0.76
TRAF1-202ENST00000540010 TMEM130Q8N3G9 435 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 TEX9Q8N6V9 391 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 SOCS4Q8WXH5 440 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 HIC2Q96JB3 615 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 ERVK-5Q9HDB9 667 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 SLCO1B3Q9NPD5 702 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 DNPEPQ9ULA0 475 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 GRID1Q9ULK0 1009 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 PAPPA2Q9BXP8 1791 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 ADRA1DP25100 572 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 ATICP31939 592 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 PTPN11Q06124 597 aaPredicted RBP10.32□□□□□ -0.76
TRAF1-202ENST00000540010 USP10Q14694 798 aaKnown RBP10.32□□□□□ -0.76
TRAF1-202ENST00000540010 RASA2Q15283 850 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 SNX30Q5VWJ9 437 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 MFSD14CQ5VZR4 134 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 IFNL1Q8IU54 200 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 APBA2Q99767 749 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 KATNBL1Q9H079 304 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 ITGA11Q9UKX5 1188 aa10.32□□□□□ -0.76
TRAF1-202ENST00000540010 XPO1O14980 1071 aaKnown RBP10.31□□□□□ -0.76
TRAF1-202ENST00000540010 E2F6O75461 281 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 EIF4BP23588 611 aaKnown RBP10.31□□□□□ -0.76
TRAF1-202ENST00000540010 AKAP5P24588 427 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 TNFRSF8P28908 595 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 ASPAP45381 313 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 INHBEP58166 350 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 ATP13A4Q4VNC1 1196 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 DENND1BQ6P3S1 775 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 SPDYE1Q8NFV5 336 aaPredicted RBP10.31□□□□□ -0.76
TRAF1-202ENST00000540010 TFAP2BQ92481 460 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 ZNF669Q96BR6 464 aaPredicted RBP10.31□□□□□ -0.76
TRAF1-202ENST00000540010 TMEM176AQ96HP8 235 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 TMEM120AQ9BXJ8 343 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 DCLK3Q9C098 648 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 ZNF518BQ9C0D4 1074 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 PIH1D1Q9NWS0 290 aaKnown RBP10.31□□□□□ -0.76
TRAF1-202ENST00000540010 RPL7AP62424 266 aaKnown RBP10.31□□□□□ -0.76
TRAF1-202ENST00000540010 CACNB2Q08289 660 aaPredicted RBP10.31□□□□□ -0.76
TRAF1-202ENST00000540010 TTC39BQ5VTQ0 682 aaPredicted RBP10.31□□□□□ -0.76
TRAF1-202ENST00000540010 C16orf87Q6PH81 154 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 METTL23Q86XA0 190 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 CD302Q8IX05 232 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 DDIASQ8IXT1 998 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 BBS5Q8N3I7 341 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 KCNK16Q96T55 309 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 MYLK2Q9H1R3 596 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 TREHO43280 583 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 ADCY6O43306 1168 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 PSTPIP1O43586 416 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 ETS1P14921 441 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 MMP8P22894 467 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 PTPN4P29074 926 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 MCCD1P59942 119 aaPredicted RBP10.31□□□□□ -0.76
TRAF1-202ENST00000540010 TCEAL1Q15170 157 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 CNGA2Q16280 664 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 MREGQ8N565 214 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 TTC8Q8TAM2 541 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 CMTM5Q96DZ9 223 aa10.31□□□□□ -0.76
TRAF1-202ENST00000540010 SH3GL2Q99962 352 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms