RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 PJA1Q8NG27 643 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 GOT1L1Q8NHS2 421 aaPredicted RBP13.04□□□□□ -0.32
DDX55-206ENST00000539934 SLC7A3Q8WY07 619 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 FAM167AQ96KS9 214 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 TTC25Q96NG3 672 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 DNAJC7Q99615 494 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 PBX4Q9BYU1 374 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 TTYH3Q9C0H2 523 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 CDH19Q9H159 772 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 TMEM206Q9H813 350 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 AGPAT5Q9NUQ2 364 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 TAS2R7Q9NYW3 318 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 ZNHIT2Q9UHR6 403 aa13.04□□□□□ -0.32
DDX55-206ENST00000539934 PLXNA1Q9UIW2 1896 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 F8W810 466 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 RTCAO00442 366 aaKnown RBP13.03□□□□□ -0.32
DDX55-206ENST00000539934 CNOT3O75175 753 aaKnown RBP13.03□□□□□ -0.32
DDX55-206ENST00000539934 TJP3O95049 919 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 LYPLA2O95372 231 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 CHEK2O96017 543 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 PABPC4LP0CB38 370 aaKnown RBP13.03□□□□□ -0.32
DDX55-206ENST00000539934 CHRNEQ04844 493 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 UGCGQ16739 394 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 FYB2Q5VWT5 728 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.03□□□□□ -0.32
DDX55-206ENST00000539934 ARHGAP24Q8N264 748 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 CPSF7Q8N684 471 aaKnown RBP13.03□□□□□ -0.32
DDX55-206ENST00000539934 DNERQ8NFT8 737 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 RDM1Q8NG50 284 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 OR8H1Q8NGG4 311 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 OR10Z1Q8NGY1 313 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 NLRP7Q8WX94 980 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 SLC47A1Q96FL8 570 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 ARL5BQ96KC2 179 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 UHRF1Q96T88 793 aaPredicted RBP13.03□□□□□ -0.32
DDX55-206ENST00000539934 FAM207AQ9NSI2 230 aaPredicted RBP13.03□□□□□ -0.32
DDX55-206ENST00000539934 ZNF69Q9UC07 566 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 DPP7Q9UHL4 492 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 PCDHA10Q9Y5I2 948 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 ADGRG1Q9Y653 693 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 ASTN1O14525 1302 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 MYH9P35579 1960 aaKnown RBP13.03□□□□□ -0.32
DDX55-206ENST00000539934 A0A1W2PQJ5 194 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 SH3PXD2BA1X283 911 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 ZSCAN5BA6NJL1 495 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 NR3C1P04150 777 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 VCLP18206 1134 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 ATF6P18850 670 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 S100A12P80511 92 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 TFF2Q03403 129 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 STXBP2Q15833 593 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 ZC2HC1CQ53FD0 456 aaPredicted RBP13.03□□□□□ -0.32
DDX55-206ENST00000539934 ANGPTL8Q6UXH0 198 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 C16orf59Q7L2K0 433 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 TRIM59Q8IWR1 403 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 ZNF606Q8WXB4 792 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 STON2Q8WXE9 905 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 DNAJC9Q8WXX5 260 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 GATA6Q92908 595 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 ASB2Q96Q27 587 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 WDR24Q96S15 920 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 TBCBQ99426 244 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 PPP1R12CQ9BZL4 782 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 RAD21L1Q9H4I0 556 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 SOX13Q9UN79 622 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 SIK3Q9Y2K2 1263 aa13.03□□□□□ -0.32
DDX55-206ENST00000539934 TDRKHQ9Y2W6 561 aaKnown RBP13.03□□□□□ -0.32
DDX55-206ENST00000539934 UBE4BO95155 1302 aa13.02□□□□□ -0.32
DDX55-206ENST00000539934 TK2O00142 265 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 CLIC2O15247 247 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 CSF2RAP15509 400 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 MASP1P48740 699 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 C21orf58P58505 322 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 MYL6P60660 151 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 CNTN2Q02246 1040 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 SP4Q02446 784 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 SSPNQ14714 243 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 NFE2Q16621 373 aaPredicted RBP13.02□□□□□ -0.33
DDX55-206ENST00000539934 PHKG1Q16816 387 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 XKR9Q5GH70 373 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 C6orf132Q5T0Z8 1188 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 RANBP10Q6VN20 620 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 ZNF720Q7Z2F6 126 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 FAM124AQ86V42 546 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 ZNF565Q8N9K5 539 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 EME1Q96AY2 570 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 FAM122AQ96E09 287 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 SEC16BQ96JE7 1060 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 GAS2L1Q99501 681 aaPredicted RBP13.02□□□□□ -0.33
DDX55-206ENST00000539934 CHP1Q99653 195 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 SH2D3AQ9BRG2 576 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 CAAP1Q9H8G2 361 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 JPH1Q9HDC5 661 aaPredicted RBP13.02□□□□□ -0.33
DDX55-206ENST00000539934 IL37Q9NZH6 218 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 TRPM5Q9NZQ8 1165 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 ARMCX3Q9UH62 379 aaPredicted RBP13.02□□□□□ -0.33
DDX55-206ENST00000539934 SLC7A8Q9UHI5 535 aa13.02□□□□□ -0.33
DDX55-206ENST00000539934 FAF1Q9UNN5 650 aaPredicted RBP13.02□□□□□ -0.33
DDX55-206ENST00000539934 ZNFX1Q9P2E3 1918 aaKnown RBP13.02□□□□□ -0.33
DDX55-206ENST00000539934 PRRC2BQ5JSZ5 2229 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms