RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 APOBEC2Q9Y235 224 aaKnown RBP13.72□□□□□ -0.21
UBE3B-209ENST00000539584 ANKRD33BA6NCL7 494 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 LYNP07948 512 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 SRGAP2CP0DJJ0 459 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 PIM1P11309 404 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-209ENST00000539584 IL4RP24394 825 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 TCF7P36402 384 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-209ENST00000539584 CLCN2P51788 898 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 KDSRQ06136 332 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 MAP3K21Q5TCX8 1036 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 C1orf228Q6PIY5 440 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 MARK2Q7KZI7 788 aaKnown RBP13.71□□□□□ -0.21
UBE3B-209ENST00000539584 NCAPG2Q86XI2 1143 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 NT5DC4Q86YG4 428 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 C1orf127Q8N9H9 656 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 NLRP4Q96MN2 994 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 OLFM3Q96PB7 478 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 MPHOSPH6Q99547 160 aaKnown RBP13.71□□□□□ -0.21
UBE3B-209ENST00000539584 MECRQ9BV79 373 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 PPP1R12CQ9BZL4 782 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 ELOVL4Q9GZR5 314 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 PLAC1Q9HBJ0 212 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 SLC4A7Q9Y6M7 1214 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 LOC285556D6RIA3 1793 aa13.71□□□□□ -0.21
UBE3B-209ENST00000539584 C2orf71A6NGG8 1288 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 LGR5O75473 907 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 PRDX6P30041 224 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 CPOXP36551 454 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 HMGCS2P54868 508 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 MTM1Q13496 603 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 SEMA5AQ13591 1074 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 EFHC1Q5JVL4 640 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 STEAP4Q687X5 459 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 IZUMO2Q6UXV1 221 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 PQLC3Q8N755 202 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 PPP4R1Q8TF05 950 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 DEPDC1BQ8WUY9 529 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 CMTM5Q96DZ9 223 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 HEXIM2Q96MH2 286 aaKnown RBP13.71□□□□□ -0.22
UBE3B-209ENST00000539584 CENPKQ9BS16 269 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 GBA2Q9HCG7 927 aaPredicted RBP13.71□□□□□ -0.22
UBE3B-209ENST00000539584 PCDH18Q9HCL0 1135 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 S100A14Q9HCY8 104 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 DNAJC28Q9NX36 388 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 MORF4L1Q9UBU8 362 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 GTF2IRD1Q9UHL9 959 aa13.71□□□□□ -0.22
UBE3B-209ENST00000539584 COL11A1P12107 1806 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-209ENST00000539584 PRR5-ARHGAP8B1AHC4 643 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 CAPN15O75808 1086 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 CSH1P0DML2 217 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 CSH2P0DML3 217 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 MCF2P10911 925 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 CCDC130P13994 396 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 ALOX15P16050 662 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-209ENST00000539584 ACAT1P24752 427 aaKnown RBP13.7□□□□□ -0.22
UBE3B-209ENST00000539584 SDC4P31431 198 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 FDFT1P37268 417 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 CPA2P48052 419 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 ARHGAP8P85298 464 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 BTKQ06187 659 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 FAM187BQ17R55 369 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 RNF220Q5VTB9 566 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 OR6B2Q6IFH4 312 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 ACAD11Q709F0 780 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 FAM172AQ8WUF8 416 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 ZBTB10Q96DT7 871 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 TRIM4Q9C037 500 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 SMYD2Q9NRG4 433 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 PCMTD2Q9NV79 361 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 PRMT7Q9NVM4 692 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-209ENST00000539584 WASF2Q9Y6W5 498 aa13.7□□□□□ -0.22
UBE3B-209ENST00000539584 A0A088AWK7 358 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 EIF4E1BA6NMX2 242 aaKnown RBP13.69□□□□□ -0.22
UBE3B-209ENST00000539584 SPDYE16A6NNV3 312 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-209ENST00000539584 HACD1B0YJ81 288 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 SERPINE1P05121 402 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 RAP1GAPP47736 663 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 COPAP53621 1224 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 ALDH18A1P54886 795 aaKnown RBP13.69□□□□□ -0.22
UBE3B-209ENST00000539584 CDH8P55286 799 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 ASPHQ12797 758 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 CCDC14Q49A88 953 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 FASTKD1Q53R41 847 aaKnown RBP13.69□□□□□ -0.22
UBE3B-209ENST00000539584 KBTBD2Q8IY47 623 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 CCDC33Q8N5R6 958 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 PCDH19Q8TAB3 1148 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 ACTRT2Q8TDY3 377 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 JDP2Q8WYK2 163 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 TWNKQ96RR1 684 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 CDT1Q9H211 546 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 NRDE2Q9H7Z3 1164 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 VCX3AQ9NNX9 186 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 EIF2B3Q9NR50 452 aaKnown RBP13.69□□□□□ -0.22
UBE3B-209ENST00000539584 NDUFA13Q9P0J0 144 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 HEY1Q9Y5J3 304 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 HMX2A2RU54 273 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 EME2A4GXA9 379 aaPredicted RBP13.69□□□□□ -0.22
UBE3B-209ENST00000539584 L1CAMP32004 1257 aa13.69□□□□□ -0.22
UBE3B-209ENST00000539584 SCNN1AP37088 669 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms