RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 NOX5Q96PH1 765 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 SLC2A13Q96QE2 648 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 CDK5RAP1Q96SZ6 601 aaKnown RBP16.45■□□□□ 0.22
RPAIN-206ENST00000539417 HAUS4Q9H6D7 363 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 AIPL1Q9NZN9 384 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 DLGAP2Q9P1A6 1054 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 CALCOCO1Q9P1Z2 691 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 AGO1Q9UL18 857 aaKnown RBP16.45■□□□□ 0.22
RPAIN-206ENST00000539417 MYO6Q9UM54 1294 aa16.45■□□□□ 0.22
RPAIN-206ENST00000539417 TFE3P19532 575 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-206ENST00000539417 OPRD1P41143 372 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 SLC6A11P48066 632 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 SFMBT2Q5VUG0 894 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 OTUD1Q5VV17 481 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-206ENST00000539417 ZNF852Q6ZMS4 543 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 DENND1CQ8IV53 801 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 SFTPA1Q8IWL2 248 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 CPA6Q8N4T0 437 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 EZH1Q92800 747 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-206ENST00000539417 C18orf8Q96DM3 657 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 C11orf70Q9BRQ4 267 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 EDEM3Q9BZQ6 932 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 SYNCQ9H7C4 482 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 C8orf33Q9H7E9 229 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-206ENST00000539417 POPDC2Q9HBU9 364 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 OLA1Q9NTK5 396 aaKnown RBP16.44■□□□□ 0.22
RPAIN-206ENST00000539417 RBM12Q9NTZ6 932 aaKnown RBP16.44■□□□□ 0.22
RPAIN-206ENST00000539417 SEPT11Q9NVA2 429 aaKnown RBP16.44■□□□□ 0.22
RPAIN-206ENST00000539417 STRIP2Q9ULQ0 834 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 CAPN11Q9UMQ6 739 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 F5P12259 2224 aa16.44■□□□□ 0.22
RPAIN-206ENST00000539417 ZNF318Q5VUA4 2279 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 A0A1W2PQJ5 194 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 GOLGA8SH3BPF8 625 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 SART1O43290 800 aaKnown RBP16.43■□□□□ 0.22
RPAIN-206ENST00000539417 IGLV3-25P01717 112 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 IGLV3-27P01718 113 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 PLEKP08567 350 aaPredicted RBP16.43■□□□□ 0.22
RPAIN-206ENST00000539417 MMP8P22894 467 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 CASP14P31944 242 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 GALK1P51570 392 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 CLCN5P51795 746 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 RNASE9P60153 205 aaKnown RBP16.43■□□□□ 0.22
RPAIN-206ENST00000539417 COG7P83436 770 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 HGSNATQ68CP4 663 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 RALGPS2Q86X27 583 aaPredicted RBP16.43■□□□□ 0.22
RPAIN-206ENST00000539417 SUGP1Q8IWZ8 645 aaKnown RBP16.43■□□□□ 0.22
RPAIN-206ENST00000539417 IPO4Q8TEX9 1081 aaKnown RBP16.43■□□□□ 0.22
RPAIN-206ENST00000539417 GOLGA1Q92805 767 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 SHDQ96IW2 340 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 FCRL2Q96LA5 508 aaPredicted RBP16.43■□□□□ 0.22
RPAIN-206ENST00000539417 NUP58Q9BVL2 599 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 SIT1Q9Y3P8 196 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 MIA3Q5JRA6 1907 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 ITIH6Q6UXX5 1313 aa16.43■□□□□ 0.22
RPAIN-206ENST00000539417 DDX3XO00571 662 aaKnown RBP eCLIP16.42■□□□□ 0.222e-11■■■■■ 31.8
RPAIN-206ENST00000539417 TRDMT1O14717 391 aaKnown RBP16.42■□□□□ 0.22
RPAIN-206ENST00000539417 SLC9A3R1O14745 358 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-206ENST00000539417 TRIM24O15164 1050 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 NFATC1O95644 943 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 CHRNB1P11230 501 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 PRKCIP41743 596 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 MLLT6P55198 1093 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-206ENST00000539417 CENPCQ03188 943 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 EIF4EBP2Q13542 120 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-206ENST00000539417 DCAF6Q58WW2 860 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 EFHC1Q5JVL4 640 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 FSTL4Q6MZW2 842 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 TPGS1Q6ZTW0 290 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 BEND5Q7L4P6 421 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 SLC26A9Q7LBE3 791 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 VSTM4Q8IW00 320 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 KIAA1958Q8N8K9 716 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 BHMTQ93088 406 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 MYEOVQ96EZ4 313 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 SPHK2Q9NRA0 654 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 ASNSD1Q9NWL6 643 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 TBC1D14Q9P2M4 693 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 XPO7Q9UIA9 1087 aaKnown RBP16.42■□□□□ 0.22
RPAIN-206ENST00000539417 LSM7Q9UK45 103 aaKnown RBP16.42■□□□□ 0.22
RPAIN-206ENST00000539417 HBS1LQ9Y450 684 aaKnown RBP16.42■□□□□ 0.22
RPAIN-206ENST00000539417 GOLGA6L7A0A1B0GV03 622 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 TMCO5BA8MYB1 307 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 MAN2B1O00754 1011 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 CAPN9O14815 690 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 CBFA2T2O43439 604 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 HSF2BPO75031 334 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 DAB1O75553 588 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 TRUB2O95900 331 aaKnown RBP16.42■□□□□ 0.22
RPAIN-206ENST00000539417 TNFAIP3P21580 790 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 FLT3P36888 993 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 TBX4P57082 545 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 ZBED6P86452 979 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 GAS6Q14393 721 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 RAB6CQ53S08 254 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 FAM102AQ5T9C2 384 aaPredicted RBP16.42■□□□□ 0.22
RPAIN-206ENST00000539417 SARM1Q6SZW1 724 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 TRIM72Q6ZMU5 477 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 NAT16Q8N8M0 369 aa16.42■□□□□ 0.22
RPAIN-206ENST00000539417 ZNF397Q8NF99 534 aaPredicted RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms