RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 LRRTM3Q86VH5 581 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 ZNF280BQ86YH2 543 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 SCML4Q8N228 414 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 PYROXD2Q8N2H3 581 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 IRGQQ8WZA9 623 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.37■□□□□ 0.05
ATL3-203ENST00000538786 PNPLA8Q9NP80 782 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 PIGVQ9NUD9 493 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 TMLHEQ9NVH6 421 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 RRN3Q9NYV6 651 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 SRRM3A6NNA2 597 aaPredicted RBP15.37■□□□□ 0.05
ATL3-203ENST00000538786 GOLGA8MH3BSY2 632 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 TMEM189-UBE2V1I3L0A0 370 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 B4GALT3O60512 393 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 GOT1P17174 413 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 BDNFP23560 247 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 RBL1P28749 1068 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 ATP5DP30049 168 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 MMP13P45452 471 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 BASP1P80723 227 aaKnown RBP15.37■□□□□ 0.05
ATL3-203ENST00000538786 GBE1Q04446 702 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 PM20D1Q6GTS8 502 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 ZBED8Q8IZ13 594 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 SLC7A14Q8TBB6 771 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 PGAP3Q96FM1 320 aaPredicted RBP15.37■□□□□ 0.05
ATL3-203ENST00000538786 TMEM161AQ9NX61 479 aa15.37■□□□□ 0.05
ATL3-203ENST00000538786 XPO7Q9UIA9 1087 aaKnown RBP15.37■□□□□ 0.05
ATL3-203ENST00000538786 TSC2P49815 1807 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 SYNJ2BP-COX16A0A087WUM0 186 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 H3BRJ5 948 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 CHADO15335 359 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 NCAM1P13591 858 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 NRLP54845 237 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 YWHAHQ04917 246 aaPredicted RBP15.36■□□□□ 0.05
ATL3-203ENST00000538786 SLC10A2Q12908 348 aaPredicted RBP15.36■□□□□ 0.05
ATL3-203ENST00000538786 BFSP2Q13515 415 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 FASTKD3Q14CZ7 662 aaKnown RBP15.36■□□□□ 0.05
ATL3-203ENST00000538786 SLC45A4Q5BKX6 768 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 EFHC2Q5JST6 749 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 NCBP2-AS2Q69YL0 99 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 C4orf22Q6V702 233 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 TAOK1Q7L7X3 1001 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 BHLHA9Q7RTU4 235 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 COLGALT2Q8IYK4 626 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 TAB3Q8N5C8 712 aaPredicted RBP15.36■□□□□ 0.05
ATL3-203ENST00000538786 NTAN1Q96AB6 310 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 TMEM209Q96SK2 561 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 TBC1D13Q9NVG8 400 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 SAGE1Q9NXZ1 904 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 COX16Q9P0S2 106 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 LGALS13Q9UHV8 139 aa15.36■□□□□ 0.05
ATL3-203ENST00000538786 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.36■□□□□ 0.05
ATL3-203ENST00000538786 TCRBV7S3A2A0A539 114 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 E7ESA3 106 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 DNM1LO00429 736 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 CDH16O75309 829 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 TMEM63AO94886 807 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 AMPD1P23109 780 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 ADRA1BP35368 520 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 GAD2Q05329 585 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 SCAPQ12770 1279 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 KCNJ11Q14654 390 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 C4orf50Q6ZRC1 276 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 BZW1Q7L1Q6 419 aaKnown RBP15.35■□□□□ 0.05
ATL3-203ENST00000538786 FAM126BQ8IXS8 530 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 PDIK1LQ8N165 341 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 RNF139Q8WU17 664 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 QKIQ96PU8 341 aaKnown RBP eCLIP15.35■□□□□ 0.05
ATL3-203ENST00000538786 EPN3Q9H201 632 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 ELAC1Q9H777 363 aaKnown RBP15.35■□□□□ 0.05
ATL3-203ENST00000538786 ARHGEF4Q9NR80 690 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 DTLQ9NZJ0 730 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 FRMPD3Q5JV73 1810 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 E7EVH7 732 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 MAP3K6O95382 1288 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 F9P00740 461 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 RNASELQ05823 741 aaKnown RBP15.35■□□□□ 0.05
ATL3-203ENST00000538786 FNBP1LQ5T0N5 605 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 PPP1R21Q6ZMI0 780 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 FAM43BQ6ZT52 329 aaPredicted RBP15.35■□□□□ 0.05
ATL3-203ENST00000538786 SPATA2LQ8IUW3 424 aaPredicted RBP15.35■□□□□ 0.05
ATL3-203ENST00000538786 BCAS4Q8TDM0 211 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 OLFM3Q96PB7 478 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 TRIM62Q9BVG3 475 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 WDR6Q9NNW5 1121 aaKnown RBP15.35■□□□□ 0.05
ATL3-203ENST00000538786 RAB6BQ9NRW1 208 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 FBXW11Q9UKB1 542 aa15.35■□□□□ 0.05
ATL3-203ENST00000538786 ZMYND8Q9ULU4 1186 aaPredicted RBP15.35■□□□□ 0.05
ATL3-203ENST00000538786 TDRD15B5MCY1 1934 aaKnown RBP15.35■□□□□ 0.05
ATL3-203ENST00000538786 SF3B1O75533 1304 aaKnown RBP eCLIP15.34■□□□□ 0.054e-7■■■■■ 86.2
ATL3-203ENST00000538786 HACD1B0YJ81 288 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 TRAPPC3O43617 180 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 NBNO60934 754 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 GCATO75600 419 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 DGKIO75912 1065 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 OAZ2O95190 189 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 OR1G1P47890 313 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 CBLBQ13191 982 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 MSS51Q4VC12 460 aa15.34■□□□□ 0.05
ATL3-203ENST00000538786 HP1BP3Q5SSJ5 553 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms