RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 MYO18AQ92614 2054 aaKnown RBP25.8■■□□□ 1.72
RAB40C-204ENST00000538492 UGT1A9O60656 530 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 ALADP13716 330 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 GRIA1P42261 906 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 FAM110CQ1W6H9 321 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 TLK2Q86UE8 772 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 ZNF560Q96MR9 790 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 FRMD8Q9BZ67 464 aaPredicted RBP25.79■■□□□ 1.72
RAB40C-204ENST00000538492 UGT1A7Q9HAW7 530 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 UGT1A10Q9HAW8 530 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 UGT1A8Q9HAW9 530 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 SMYD2Q9NRG4 433 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP25.79■■□□□ 1.72
RAB40C-204ENST00000538492 SYNJ2BP-COX16A0A087WUM0 186 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 TAF6P49848 677 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 NEK3P51956 506 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 ZNF534Q76KX8 674 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 PARK7Q99497 189 aaKnown RBP25.79■■□□□ 1.72
RAB40C-204ENST00000538492 TXLNGQ9NUQ3 528 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 DTLQ9NZJ0 730 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 COX16Q9P0S2 106 aa25.79■■□□□ 1.72
RAB40C-204ENST00000538492 GNEQ9Y223 722 aaKnown RBP25.79■■□□□ 1.72
RAB40C-204ENST00000538492 NEFHP12036 1026 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 SKIV2L2P42285 1042 aaKnown RBP25.78■■□□□ 1.72
RAB40C-204ENST00000538492 ETV4P43268 484 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 SLC18A2Q05940 514 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 RIPK1Q13546 671 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 TTC39BQ5VTQ0 682 aaPredicted RBP25.78■■□□□ 1.72
RAB40C-204ENST00000538492 OLFML2BQ68BL8 750 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 NCBP2-AS2Q69YL0 99 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 ZNF449Q6P9G9 518 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 ADGRF2Q8IZF7 708 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 ARRDC4Q8NCT1 418 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 RFWD2Q8NHY2 731 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 TMPRSS4Q9NRS4 437 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 GDAP2Q9NXN4 497 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 DCAF8L1A6NGE4 600 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 CLDN5O00501 218 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 MAGEA6P43360 314 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 ADIGQ0VDE8 80 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 UBXN11Q5T124 520 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 HEATR6Q6AI08 1181 aaKnown RBP25.78■■□□□ 1.72
RAB40C-204ENST00000538492 UNC5AQ6ZN44 842 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 NLRP9Q7RTR0 991 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 DEFB106AQ8N104 65 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 MAGEC3Q8TD91 643 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 FBXO41Q8TF61 875 aa25.78■■□□□ 1.72
RAB40C-204ENST00000538492 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.78■■□□□ 1.72
RAB40C-204ENST00000538492 ZNF487B1APH4 448 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 HUS1O60921 280 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 GCATO75600 419 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 ACAT1P24752 427 aaKnown RBP25.77■■□□□ 1.72
RAB40C-204ENST00000538492 PITX1P78337 314 aaPredicted RBP25.77■■□□□ 1.72
RAB40C-204ENST00000538492 BMPR2Q13873 1038 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 CDHR3Q6ZTQ4 885 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 PIGZQ86VD9 579 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 CPA4Q9UI42 421 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 APOEP02649 317 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 TROVE2P10155 538 aaKnown RBP eCLIP25.77■■□□□ 1.72
RAB40C-204ENST00000538492 ZFXP17010 805 aaPredicted RBP25.77■■□□□ 1.72
RAB40C-204ENST00000538492 SLC8A1P32418 973 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 SULT1E1P49888 294 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 DCAF6Q58WW2 860 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 TRMT10BQ6PF06 316 aaKnown RBP25.77■■□□□ 1.72
RAB40C-204ENST00000538492 DENND5BQ6ZUT9 1274 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 OSTM1Q86WC4 334 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 LGMNQ99538 433 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 FLRT1Q9NZU1 646 aa25.77■■□□□ 1.72
RAB40C-204ENST00000538492 ZNF638Q14966 1978 aaKnown RBP25.76■■□□□ 1.71
RAB40C-204ENST00000538492 IQCA1LA6NCM1 817 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 DHRS4L1P0CG22 281 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 BGNP21810 368 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 IGFBP6P24592 240 aaPredicted RBP25.76■■□□□ 1.71
RAB40C-204ENST00000538492 ACADSBP45954 432 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 NR2C2P49116 596 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 RPL34P49207 117 aaKnown RBP25.76■■□□□ 1.71
RAB40C-204ENST00000538492 PCBP1Q15365 356 aaKnown RBP eCLIP25.76■■□□□ 1.71
RAB40C-204ENST00000538492 B3GALNT2Q8NCR0 500 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 SIGLEC10Q96LC7 697 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 QKIQ96PU8 341 aaKnown RBP eCLIP25.76■■□□□ 1.71
RAB40C-204ENST00000538492 SRPK1Q96SB4 655 aaKnown RBP25.76■■□□□ 1.71
RAB40C-204ENST00000538492 TSSK1BQ9BXA7 367 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 L3MBTL1Q9Y468 752 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 IPPQ9Y573 584 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 NUMBLQ9Y6R0 609 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 A0A0G2JND7 137 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 COPEO14579 308 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 BEST1O76090 585 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 CBX6O95503 412 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 AXLP30530 894 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 MATKP42679 507 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 LILRA4P59901 499 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 BEX3Q00994 111 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 TAF1BQ53T94 588 aaPredicted RBP25.76■■□□□ 1.71
RAB40C-204ENST00000538492 MTDHQ86UE4 582 aaKnown RBP25.76■■□□□ 1.71
RAB40C-204ENST00000538492 MCUQ8NE86 351 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 UPF1Q92900 1129 aaKnown RBP eCLIP25.76■■□□□ 1.712e-7■■■■■ 32.6
RAB40C-204ENST00000538492 HSFY1Q96LI6 401 aa25.76■■□□□ 1.71
RAB40C-204ENST00000538492 IQCGQ9H095 443 aaKnown RBP25.76■■□□□ 1.71
RAB40C-204ENST00000538492 CACNG4Q9UBN1 327 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms