RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 TBX4P57082 545 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DUSP6Q16828 381 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 LONRF2Q1L5Z9 754 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ERMARDQ5T6L9 678 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DAB2IPQ5VWQ8 1189 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 GPR153Q6NV75 609 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TMEM92Q6UXU6 159 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SCD5Q86SK9 330 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 FAM131BQ86XD5 332 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DQX1Q8TE96 717 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SLC22A17Q8WUG5 538 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SMG7Q92540 1137 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 OSBPL9Q96SU4 736 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 NPY6RQ99463 290 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 GAS2L1Q99501 681 aaPredicted RBP11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CALN1Q9BXU9 219 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PRDM12Q9H4Q4 367 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DHX35Q9H5Z1 703 aaKnown RBP11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 NMUR1Q9HB89 426 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DZANK1Q9NVP4 752 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CLIC5Q9NZA1 410 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 STIM2Q9P246 746 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 DNMT3LQ9UJW3 386 aa11.1□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TRAV19A0A0A6YYK7 116 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 GOLGA6L10A0A0M3HER8 536 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SOX1O00570 391 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TLR5O60602 858 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MOCS2O96007 188 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PRLRP16471 622 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 HDCP19113 662 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CCR1P32246 355 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CTNNA1P35221 906 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ARL4AP40617 200 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CDH6P55285 790 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TAS2R40P59535 323 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ZNF211Q13398 564 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CAMK1Q14012 370 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SMTNL2Q2TAL5 461 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 LRIT3Q3SXY7 679 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 PPP6R3Q5H9R7 873 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SH3PXD2AQ5TCZ1 1133 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 LRRC38Q5VT99 294 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 KAZNQ674X7 775 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 BEND5Q7L4P6 421 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ADGRD2Q7Z7M1 963 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TAC4Q86UU9 113 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 RFX6Q8HWS3 928 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ATP6V0D2Q8N8Y2 350 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 LEMD2Q8NC56 503 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MAIP1Q8WWC4 291 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 KHSRPQ92945 711 aaKnown RBP eCLIP11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TRMT2BQ96GJ1 504 aaKnown RBP11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 HES6Q96HZ4 224 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TTLL2Q9BWV7 592 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 TLR10Q9BXR5 811 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 SFXN1Q9H9B4 322 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 RRAGDQ9NQL2 400 aaPredicted RBP11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 KLHL11Q9NVR0 708 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ZDHHC7Q9NXF8 308 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 IL37Q9NZH6 218 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 CDC23Q9UJX2 597 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 HCFC2Q9Y5Z7 792 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 MYO9BQ13459 2157 aa11.09□□□□□ -0.63
TNFRSF1A-211ENST00000538363 ZNF840PA6NDX5 716 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 EPOPA6NHQ4 379 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PI4K2BG5E9Z4 385 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CREB3O43889 395 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 LRCH4O75427 683 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RFPL2O75678 378 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CKMP06732 381 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RARAP10276 462 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 HARS2P49590 506 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 COG7P83436 770 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 ZNF252P-AS1Q0IIN9 211 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PDK2Q15119 407 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 WHAMMP3Q1A5X7 153 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TCEAL5Q5H9L2 206 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 KCNT1Q5JUK3 1230 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 RARS2Q5T160 578 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PAPD7Q5XG87 772 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CCDC70Q6NSX1 233 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CES5AQ6NT32 575 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TMC5Q6UXY8 1006 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 LRRC31Q6UY01 552 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 POLNQ7Z5Q5 900 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CPNE8Q86YQ8 564 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 UNC45BQ8IWX7 931 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 KATNAL2Q8IYT4 538 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CEP112Q8N8E3 955 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 EXD1Q8NHP7 514 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 KRT35Q92764 455 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 MYRFLQ96LU7 910 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 FAM161BQ96MY7 647 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 APOL5Q9BWW9 433 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 PRKD2Q9BZL6 878 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 TKTL2Q9H0I9 626 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SIK2Q9H0K1 926 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 SMOC2Q9H3U7 446 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 CCSER2Q9H7U1 834 aa11.08□□□□□ -0.64
TNFRSF1A-211ENST00000538363 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms