RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 HECTD3Q5T447 861 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 GLT6D1Q7Z4J2 308 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 NAT16Q8N8M0 369 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 DCLK3Q9C098 648 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 FAM105AQ9NUU6 356 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 FAM50BQ9Y247 325 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 MYO1GB0I1T2 1018 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 TREHO43280 583 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 DGKIO75912 1065 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CYP2A6P11509 494 aaPredicted RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 SYN1P17600 705 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 GRK3P35626 688 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 ERFP50548 548 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 SLC6A3Q01959 620 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 TP53BP2Q13625 1128 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 GALNTL6Q49A17 601 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 ANKS6Q68DC2 871 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 HIBCHQ6NVY1 386 aaPredicted RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 CEP68Q76N32 757 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 LRRC8DQ7L1W4 858 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 ZNF438Q7Z4V0 828 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 FAM124AQ86V42 546 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 IFNL1Q8IU54 200 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 NAF1Q96HR8 494 aaKnown RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 MAGED4Q96JG8 741 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 POPDC2Q9HBU9 364 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 KCNMB3Q9NPA1 279 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 HPSEQ9Y251 543 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 TNFSF13BQ9Y275 285 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 DTNAQ9Y4J8 743 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 GMNCA6NCL1 334 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 GLUD1P00367 558 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 LTFP02788 710 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 STIP1P31948 543 aaKnown RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 VSNL1P62760 191 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 DUSP28Q4G0W2 176 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 C1orf186Q6ZWK4 172 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 MCOLN2Q8IZK6 566 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 MAB21L3Q8N8X9 362 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 FBXO36Q8NEA4 188 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CXorf40AQ8TE69 158 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 FAM162AQ96A26 154 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 MTMR9Q96QG7 549 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 ING2Q9H160 280 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CDT1Q9H211 546 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 NXF3Q9H4D5 531 aaKnown RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 CYP4F12Q9HCS2 524 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CHCHD3Q9NX63 227 aaKnown RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 DUSP10Q9Y6W6 482 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 TARSL2A2RTX5 802 aaKnown RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 SDR42E2A6NKP2 422 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 SYCE1LA8MT33 242 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 O00370 1275 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CHN1P15882 459 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 BRCC3P46736 316 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 PPIGQ13427 754 aaKnown RBP eCLIP5.52□□□□□ -1.539e-7■■□□□ 13
LRP6-203ENST00000538239 NAA30Q147X3 362 aaPredicted RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 CHI3L2Q15782 390 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CBWD6Q4V339 395 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CBWD3Q5JTY5 395 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CBWD5Q5RIA9 395 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 AGAP9Q5VTM2 703 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 ZDHHC17Q8IUH5 632 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 RSPH1Q8WYR4 309 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 MAML3Q96JK9 1138 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 CEP19Q96LK0 163 aa5.52□□□□□ -1.53
LRP6-203ENST00000538239 XAB2Q9HCS7 855 aaKnown RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 UBA2Q9UBT2 640 aaPredicted RBP5.52□□□□□ -1.53
LRP6-203ENST00000538239 RNF103-CHMP3A0A140T963 221 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 PROSCO94903 275 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 GRIK3Q13003 919 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 BOP1Q14137 746 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 SETMARQ53H47 684 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 DCLRE1AQ6PJP8 1040 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 LVRNQ6Q4G3 990 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 MARK2Q7KZI7 788 aaKnown RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 DET1Q7L5Y6 550 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 ZNF614Q8N883 585 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 GPR20Q99678 358 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 CCDC90BQ9GZT6 254 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 RNPEPQ9H4A4 650 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 ANKRD26Q9UPS8 1709 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 CARNS1A5YM72 827 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 CCDC22O60826 627 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 SPAG6O75602 509 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 MTA2O94776 668 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 FKBP9O95302 570 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 SERPINF2P08697 491 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 ENO3P13929 434 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 PPM1AP35813 382 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 CHI3L1P36222 383 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 CASP5P51878 434 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 PDCD2Q16342 344 aaPredicted RBP5.51□□□□□ -1.53
LRP6-203ENST00000538239 PGS1Q32NB8 556 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 CENPPQ6IPU0 288 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 DENND1BQ6P3S1 775 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 CLEC17AQ6ZS10 378 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 FKBP9P1Q75LS8 142 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 NALCNQ8IZF0 1738 aa5.51□□□□□ -1.53
LRP6-203ENST00000538239 C10orf53Q8N6V4 93 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms