RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 OLFML3Q9NRN5 406 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 TRPV2Q9Y5S1 764 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 PDK2Q15119 407 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 GPR152Q8TDT2 470 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 CMTM5Q96DZ9 223 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 PDCD2LQ9BRP1 358 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 KRCC1Q9NPI7 259 aaPredicted RBP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 RBM22Q9NW64 420 aaKnown RBP eCLIP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 MTO1Q9Y2Z2 717 aaKnown RBP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 CDY2AQ9Y6F7 541 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 CDY1Q9Y6F8 540 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 KPNA6O60684 536 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 CTNNB1P35222 781 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 NEK2P51955 445 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 TROAPQ12815 778 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 NOL9Q5SY16 702 aaKnown RBP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 FBXW10Q5XX13 1052 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 CAMKK1Q8N5S9 505 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 TDRD5Q8NAT2 981 aaKnown RBP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 SLC2A14Q8TDB8 520 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 RBBP8Q99708 897 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 NCKAP1Q9Y2A7 1128 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 FAM86B1E9PN63 330 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 FBXO21O94952 628 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 FAM86B2P0C5J1 330 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 SLC2A4P14672 509 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 PTPN11Q06124 597 aaPredicted RBP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 ILDR2Q71H61 639 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 ZNF720Q7Z2F6 126 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 COMMD2Q86X83 199 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 MMGT1Q8N4V1 131 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 CORO1BQ9BR76 489 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 RMND5AQ9H871 391 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 VANGL2Q9ULK5 521 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 CAB39Q9Y376 341 aaPredicted RBP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 LRRIQ3A6PVS8 624 aaPredicted RBP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 YWHAQP27348 245 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 CCR1P32246 355 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 TOB1P50616 345 aaPredicted RBP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 DNAL1Q4LDG9 190 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 CXCL17Q6UXB2 119 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 NT5DC4Q86YG4 428 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 CATSPER1Q8NEC5 780 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 SMARCD1Q96GM5 515 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 UBE2OQ9C0C9 1292 aaKnown RBP11.51□□□□□ -0.57
LINC00346-201ENST00000538077 MIEF1Q9NQG6 463 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 KRT84Q9NSB2 600 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 KANSL3Q9P2N6 904 aa11.51□□□□□ -0.57
LINC00346-201ENST00000538077 LINC00854A0A1B0GVQ3 168 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 GARTP22102 1010 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 AMPD1P23109 780 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 FMO4P31512 558 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 NFYCQ13952 458 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 TRIP10Q15642 601 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 ANKS1AQ92625 1134 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 USP6NLQ92738 828 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 CCT8L2Q96SF2 557 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 IL17RBQ9NRM6 502 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 DCDC2Q9UHG0 476 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 MSRAQ9UJ68 235 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 VPS9D1Q9Y2B5 631 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 A0A087X0T9 212 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 E9PBE3 544 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 KPNA3O00505 521 aaPredicted RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 KLHL41O60662 606 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 KRT16P08779 473 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 FAM228BP0C875 321 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 POLR2EP19388 210 aaKnown RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 HSD17B3P37058 310 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 GUCA1AP43080 201 aaPredicted RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 MARSP56192 900 aaKnown RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 ARHGAP17Q68EM7 881 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 KIAA1324Q6UXG2 1013 aaKnown RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 FGD2Q7Z6J4 655 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 OMDQ99983 421 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 CTNNAL1Q9UBT7 734 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 ZNF711Q9Y462 761 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 MROH1Q8NDA8 1641 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 PTPRUQ92729 1446 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 CFAP73A6NFT4 308 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 TISP43B9A030 160 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 S100A5P33763 92 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 IKBKEQ14164 716 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 PRUNE1Q86TP1 453 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 FAM124AQ86V42 546 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 SYTL1Q8IYJ3 562 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 ATP8B4Q8TF62 1192 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 SOCS4Q8WXH5 440 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 RSPH1Q8WYR4 309 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 CENPTQ96BT3 561 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 ENO2P09104 434 aaPredicted RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 ATP6V1B2P21281 511 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 NFIL3Q16649 462 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 LRRN4Q8WUT4 740 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 PPP1R10Q96QC0 940 aaKnown RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 ILKAPQ9H0C8 392 aaPredicted RBP11.5□□□□□ -0.57
LINC00346-201ENST00000538077 ISCUQ9H1K1 167 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 VPS33BQ9H267 617 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 GPSM3Q9Y4H4 160 aa11.5□□□□□ -0.57
LINC00346-201ENST00000538077 PCDHGA4Q9Y5G9 962 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms