RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 DRICH1Q6PGQ1 229 aaPredicted RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 APBB1IPQ7Z5R6 666 aaPredicted RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 FNIP1Q8TF40 1166 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 STAMBPL1Q96FJ0 436 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 SNX27Q96L92 541 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 PARK7Q99497 189 aaKnown RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 TSSK1BQ9BXA7 367 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 FOXP3Q9BZS1 431 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 KRT82Q9NSB4 513 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 KLHL8Q9P2G9 620 aaPredicted RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 HEY2Q9UBP5 337 aa9.02□□□□□ -0.97
UBE3B-208ENST00000538070 LAMA2P24043 3122 aaKnown RBP9.02□□□□□ -0.97
UBE3B-208ENST00000538070 ARID2Q68CP9 1835 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 GLTPD2A6NH11 291 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 SRRM3A6NNA2 597 aaPredicted RBP9.01□□□□□ -0.97
UBE3B-208ENST00000538070 CHUKO15111 745 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 RASSF9O75901 435 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 MOCS2O96007 188 aaPredicted RBP9.01□□□□□ -0.97
UBE3B-208ENST00000538070 PCK1P35558 622 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 PSEN2P49810 448 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 TKTL1P51854 596 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 DEUP1Q05D60 604 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 NR1H3Q13133 447 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 TNFAIP8L3Q5GJ75 292 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 NLRP9Q7RTR0 991 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 OSTM1Q86WC4 334 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 GIMAP7Q8NHV1 300 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 CXorf38Q8TB03 319 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 MS4A4AQ96JQ5 239 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 PPME1Q9Y570 386 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 IPPQ9Y573 584 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 AP1G2O75843 785 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 ATP6V1G2O95670 118 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 ABHD2P08910 425 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 BCAT1P54687 386 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 ACCSLQ4AC99 568 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 EFHC2Q5JST6 749 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 CDHR3Q6ZTQ4 885 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 COLGALT1Q8NBJ5 622 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 SLC35F5Q8WV83 523 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 CSPG4P5Q96PW8 444 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 PAAF1Q9BRP4 392 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 VPS11Q9H270 941 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 DDX43Q9NXZ2 648 aaKnown RBP9.01□□□□□ -0.97
UBE3B-208ENST00000538070 SLC24A2Q9UI40 661 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 CHKBQ9Y259 395 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 FAM237BA0A1B0GVD1 139 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 IQCA1LA6NCM1 817 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 M0QZ92 97 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 TNPO2O14787 897 aaKnown RBP9.01□□□□□ -0.97
UBE3B-208ENST00000538070 KRT37O76014 449 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 MGAT1P26572 445 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 EPHB2P29323 1055 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 SCNN1GP51170 649 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 TRIM68Q6AZZ1 485 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 RIBC1Q8N443 379 aaPredicted RBP9.01□□□□□ -0.97
UBE3B-208ENST00000538070 B3GALNT2Q8NCR0 500 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 DCAKDQ8WVC6 231 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 PRR11Q96HE9 360 aaPredicted RBP9.01□□□□□ -0.97
UBE3B-208ENST00000538070 SRPK1Q96SB4 655 aaKnown RBP9.01□□□□□ -0.97
UBE3B-208ENST00000538070 ULBP1Q9BZM6 244 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 USP29Q9HBJ7 922 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 RXFP1Q9HBX9 757 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 DDIT4Q9NX09 232 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 NOD1Q9Y239 953 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 USH1CQ9Y6N9 552 aa9.01□□□□□ -0.97
UBE3B-208ENST00000538070 RRN3P2A6NIE6 340 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 MFSD11O43934 449 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 NEBLO76041 1014 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 PSMB4P28070 264 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 L1CAMP32004 1257 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 ARFIP2P53365 341 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 SNX16P57768 344 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 LILRA4P59901 499 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 CHI3L2Q15782 390 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 PDK4Q16654 411 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 LDLRAD1Q5T700 205 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 CCDC91Q7Z6B0 441 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 TTC7BQ86TV6 843 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 LONP2Q86WA8 852 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 NUDCD3Q8IVD9 361 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 ARID3BQ8IVW6 561 aaPredicted RBP9□□□□□ -0.97
UBE3B-208ENST00000538070 AGGF1Q8N302 714 aaeCLIP9□□□□□ -0.97
UBE3B-208ENST00000538070 ANKRD52Q8NB46 1076 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 SHCBP1Q8NEM2 672 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 TRIM55Q9BYV6 548 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 ADAMTS10Q9H324 1103 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 PPARGC1AQ9UBK2 798 aaKnown RBP9□□□□□ -0.97
UBE3B-208ENST00000538070 MYBPHLA2RUH7 354 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 C17orf102A2RUQ5 167 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 GPR32O75388 356 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 B3GAT3O94766 335 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 CSH1P0DML2 217 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 CSH2P0DML3 217 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 ERVK-10P10266 1014 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 SERPINB3P29508 390 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 MCCD1P59942 119 aaPredicted RBP9□□□□□ -0.97
UBE3B-208ENST00000538070 INCA1Q0VD86 236 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 PDK2Q15119 407 aa9□□□□□ -0.97
UBE3B-208ENST00000538070 FAM187BQ17R55 369 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms