RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 DNAJC3Q13217 504 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 GEN1Q17RS7 908 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 HES3Q5TGS1 186 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 USP49Q70CQ1 688 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 GATAD2AQ86YP4 633 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 GPD1LQ8N335 351 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 FAM181AQ8N9Y4 354 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 B3GALNT2Q8NCR0 500 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 SNIP1Q8TAD8 396 aaKnown RBP11.77□□□□□ -0.53
CLPB-208ENST00000538021 TMEM176AQ96HP8 235 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 CNDP2Q96KP4 475 aaKnown RBP11.77□□□□□ -0.53
CLPB-208ENST00000538021 STRA6Q9BX79 667 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 NRSN2Q9GZP1 204 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.77□□□□□ -0.53
CLPB-208ENST00000538021 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
CLPB-208ENST00000538021 NPC1O15118 1278 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 BRINP1O60477 761 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 FSBPO95073 299 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 LDOC1O95751 146 aaPredicted RBP11.76□□□□□ -0.53
CLPB-208ENST00000538021 PRKCHP24723 683 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 ACSL1P33121 698 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 ATP5C1P36542 298 aaKnown RBP11.76□□□□□ -0.53
CLPB-208ENST00000538021 CTSKP43235 329 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 CASP5P51878 434 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 COPAP53621 1224 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 MFAP3P55082 362 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 ORC1Q13415 861 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 ZNF234Q14588 700 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 RTP5Q14D33 572 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 SURF1Q15526 300 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 WDR72Q3MJ13 1102 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 KCNT1Q5JUK3 1230 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 PRAMEF14Q5SWL7 426 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 TRAPPC11Q7Z392 1133 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 SPACA3Q8IXA5 215 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 BIRC7Q96CA5 298 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 LGMNQ99538 433 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 CIPCQ9C0C6 399 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 PCED1AQ9H1Q7 454 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 DMAP1Q9NPF5 467 aaPredicted RBP11.76□□□□□ -0.53
CLPB-208ENST00000538021 TLR8Q9NR97 1041 aaKnown RBP11.76□□□□□ -0.53
CLPB-208ENST00000538021 NXF1Q9UBU9 619 aaKnown RBP11.76□□□□□ -0.53
CLPB-208ENST00000538021 SEL1LQ9UBV2 794 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 ATP8B3O60423 1300 aa11.76□□□□□ -0.53
CLPB-208ENST00000538021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.75□□□□□ -0.53
CLPB-208ENST00000538021 ZNF233A6NK53 670 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 MDM4O15151 490 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 CST3P01034 146 aaPredicted RBP11.75□□□□□ -0.53
CLPB-208ENST00000538021 ITGAVP06756 1048 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 CDK4P11802 303 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 ACO1P21399 889 aaKnown RBP11.75□□□□□ -0.53
CLPB-208ENST00000538021 ABCB4P21439 1286 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 ACTN2P35609 894 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 C21orf59P57076 290 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 ARID5AQ03989 594 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 GRIN1Q05586 938 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 KCNH2Q12809 1159 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 ENPP2Q13822 863 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 SERPINA13PQ6UXR4 307 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 FAM35AQ86V20 835 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 CBWD2Q8IUF1 395 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 FMNL3Q8IVF7 1028 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 OR2T3Q8NH03 318 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 SORCS1Q8WY21 1168 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 NAF1Q96HR8 494 aaKnown RBP11.75□□□□□ -0.53
CLPB-208ENST00000538021 LHX5Q9H2C1 402 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 OSGEPQ9NPF4 335 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 COMMD8Q9NX08 183 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 IL37Q9NZH6 218 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 FBXO10Q9UK96 956 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 NUDT5Q9UKK9 219 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 SLC27A6Q9Y2P4 619 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 NUMA1Q14980 2115 aa11.75□□□□□ -0.53
CLPB-208ENST00000538021 A0A1B0GTQ1 180 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 FAM92AA1XBS5 289 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 B8ZZF3 427 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 DFNA5O60443 496 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 AP1G2O75843 785 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 CLSTN1O94985 981 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 SEMA4FO95754 770 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 C1SP09871 688 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 FAM163BP0C2L3 166 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 DLATP10515 647 aaKnown RBP11.74□□□□□ -0.53
CLPB-208ENST00000538021 IDEP14735 1019 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 GAP43P17677 238 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 TNNI1P19237 187 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 CD27P26842 260 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 PAQR9Q6ZVX9 377 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 ANKS1BQ7Z6G8 1248 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 LURAP1LQ8IV03 231 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 WDR49Q8IV35 697 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 EID2Q8N6I1 236 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 P2RY11Q96G91 374 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 SMARCD1Q96GM5 515 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 ZSCAN31Q96LW9 406 aaPredicted RBP11.74□□□□□ -0.53
CLPB-208ENST00000538021 ACE2Q9BYF1 805 aaPredicted RBP11.74□□□□□ -0.53
CLPB-208ENST00000538021 FGFBP2Q9BYJ0 223 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 SEMA4CQ9C0C4 833 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 BTBD1Q9H0C5 482 aa11.74□□□□□ -0.53
CLPB-208ENST00000538021 FBXO44Q9H4M3 255 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms