RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 NT5DC4Q86YG4 428 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 ARID3BQ8IVW6 561 aaPredicted RBP14.83□□□□□ -0.04
USP44-203ENST00000537435 MTBPQ96DY7 904 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 LPIN3Q9BQK8 851 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 ZNF395Q9H8N7 513 aaPredicted RBP14.83□□□□□ -0.04
USP44-203ENST00000537435 MKS1Q9NXB0 559 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 KCNK4Q9NYG8 393 aa14.83□□□□□ -0.04
USP44-203ENST00000537435 A6NJR5 290 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 FAM159BA6NKW6 160 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 CXCL11O14625 94 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 GCATO75600 419 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 ZNF286BP0CG31 522 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 TPSB2P20231 275 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 L1CAMP32004 1257 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 IREB2P48200 963 aaKnown RBP14.82□□□□□ -0.04
USP44-203ENST00000537435 KPNB1Q14974 876 aaKnown RBP14.82□□□□□ -0.04
USP44-203ENST00000537435 TPSAB1Q15661 275 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 DPYSL2Q16555 572 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 C4orf22Q6V702 233 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 ARMCX2Q7L311 632 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 NUDCD3Q8IVD9 361 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 NDUFAF2Q8N183 169 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 CLEC4CQ8WTT0 213 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 AFG1LQ8WV93 481 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 APBB2Q92870 758 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.82□□□□□ -0.04
USP44-203ENST00000537435 SIRPGQ9P1W8 387 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 HMX2A2RU54 273 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 PAX7P23759 505 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 CPA2P48052 419 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 SESN3P58005 492 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 OCRLQ01968 901 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 LAMC2Q13753 1193 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 BLMHQ13867 455 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 ACSBG2Q5FVE4 666 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 FAM91A1Q658Y4 838 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 MTHFD1LQ6UB35 978 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 KCNT2Q6UVM3 1135 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 MOB2Q70IA6 237 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 ARHGEF4Q9NR80 690 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 PCDHA11Q9Y5I1 949 aa14.82□□□□□ -0.04
USP44-203ENST00000537435 ASB14A6NK59 587 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 ZNF487B1APH4 448 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 SMNDC1O75940 238 aaKnown RBP eCLIP14.81□□□□□ -0.04
USP44-203ENST00000537435 KITP10721 976 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 RARBP10826 455 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 GRM5P41594 1212 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 TEX44Q53QW1 395 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 SULF1Q8IWU6 871 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 C7orf31Q8N865 590 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 OR6B3Q8NGW1 331 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 MICAL1Q8TDZ2 1067 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 DEPDC1BQ8WUY9 529 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 ZMAT2Q96NC0 199 aaKnown RBP14.81□□□□□ -0.04
USP44-203ENST00000537435 MARCOQ9UEW3 520 aaPredicted RBP14.81□□□□□ -0.04
USP44-203ENST00000537435 AP4E1Q9UPM8 1137 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 NR2E3Q9Y5X4 410 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 PAPPA2Q9BXP8 1791 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 KAT6AQ92794 2004 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 EIF4E1BA6NMX2 242 aaKnown RBP14.81□□□□□ -0.04
USP44-203ENST00000537435 LIN7AO14910 233 aaPredicted RBP14.81□□□□□ -0.04
USP44-203ENST00000537435 HCRTO43612 131 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 SKAP2O75563 359 aaPredicted RBP14.81□□□□□ -0.04
USP44-203ENST00000537435 KRT36O76013 467 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 ZFXP17010 805 aaPredicted RBP14.81□□□□□ -0.04
USP44-203ENST00000537435 ATP6V1C1P21283 382 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 PTPN9P43378 593 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 RCN1Q15293 331 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 CCDC6Q16204 474 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 ZDHHC17Q8IUH5 632 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 TEX9Q8N6V9 391 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 WDR60Q8WVS4 1066 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 DCPSQ96C86 337 aaKnown RBP14.81□□□□□ -0.04
USP44-203ENST00000537435 KCTD15Q96SI1 283 aaPredicted RBP14.81□□□□□ -0.04
USP44-203ENST00000537435 DPEP3Q9H4B8 488 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 MROH8Q9H579 483 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 MTMR10Q9NXD2 777 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 STOML1Q9UBI4 398 aa14.81□□□□□ -0.04
USP44-203ENST00000537435 PPARGC1AQ9UBK2 798 aaKnown RBP14.81□□□□□ -0.04
USP44-203ENST00000537435 NPTXRO95502 500 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 TOP3BO95985 862 aaKnown RBP14.8□□□□□ -0.04
USP44-203ENST00000537435 CRHR1P34998 444 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 SERPINB9P50453 376 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 SNX16P57768 344 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 HEATR6Q6AI08 1181 aaKnown RBP14.8□□□□□ -0.04
USP44-203ENST00000537435 DENND5BQ6ZUT9 1274 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 TREML1Q86YW5 311 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 STKLD1Q8NE28 680 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 DNAJC9Q8WXX5 260 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 QKIQ96PU8 341 aaKnown RBP eCLIP14.8□□□□□ -0.04
USP44-203ENST00000537435 CSPG4P5Q96PW8 444 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 LBHD1Q9BQE6 289 aaPredicted RBP14.8□□□□□ -0.04
USP44-203ENST00000537435 C11orf84Q9BUA3 381 aaPredicted RBP14.8□□□□□ -0.04
USP44-203ENST00000537435 C20orf27Q9GZN8 174 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 MMADHCQ9H3L0 296 aaPredicted RBP14.8□□□□□ -0.04
USP44-203ENST00000537435 SNTG2Q9NY99 539 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 TUBGCP4Q9UGJ1 667 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 SPDYE5A6NIY4 337 aa14.8□□□□□ -0.04
USP44-203ENST00000537435 F5H423 210 aaPredicted RBP14.8□□□□□ -0.04
USP44-203ENST00000537435 ENO1P06733 434 aaKnown RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms