RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 TSPAN19P0C672 248 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 RPA3P35244 121 aaPredicted RBP12.13□□□□□ -0.47
POLR1B-216ENST00000537335 PADI6Q6TGC4 694 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 STOX1Q6ZVD7 989 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 OTOAQ7RTW8 1153 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 EMC1Q8N766 993 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 HSPBAP1Q96EW2 488 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 NSMCE3Q96MG7 304 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 GNPTGQ9UJJ9 305 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 GNEQ9Y223 722 aaKnown RBP12.13□□□□□ -0.47
POLR1B-216ENST00000537335 A2MP01023 1474 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 I3L521 148 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 SPTLC1O15269 473 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 GMFBP60983 142 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 DPYSQ14117 519 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 LDLRAP1Q5SW96 308 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 POTEGQ6S5H5 508 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 GSTCDQ8NEC7 633 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 RGS18Q9NS28 235 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 TOR4AQ9NXH8 423 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 EIF3LQ9Y262 564 aaKnown RBP12.13□□□□□ -0.47
POLR1B-216ENST00000537335 DNMT1P26358 1616 aaKnown RBP12.13□□□□□ -0.47
POLR1B-216ENST00000537335 PZPP20742 1482 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 FAM237BA0A1B0GVD1 139 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 FAM240BA0A1B0GVZ2 78 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 SYNCRIPO60506 623 aaKnown RBP12.13□□□□□ -0.47
POLR1B-216ENST00000537335 STX11O75558 287 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 MSH3P20585 1137 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 AKT1P31749 480 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 SULT1C3Q6IMI6 304 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 ANO7Q6IWH7 933 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 MCEEQ96PE7 176 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 PLEKHA5Q9HAU0 1116 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 NDFIP2Q9NV92 336 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 C3orf18Q9UK00 162 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 NUP50Q9UKX7 468 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 NDUFAF1Q9Y375 327 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 YEATS2Q9ULM3 1422 aa12.13□□□□□ -0.47
POLR1B-216ENST00000537335 MYL12BO14950 172 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 HIRAP54198 1017 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 OSTNP61366 133 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 NME3Q13232 169 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 PIWIL2Q8TC59 973 aaKnown RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 PRRG3Q9BZD7 231 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 MAP3K20Q9NYL2 800 aaKnown RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 RGS17Q9UGC6 210 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 POLG2Q9UHN1 485 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 PRPF19Q9UMS4 504 aaKnown RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 SF3B1O75533 1304 aaKnown RBP eCLIP12.12□□□□□ -0.479e-6■■■■■ 68.9
POLR1B-216ENST00000537335 NPHP3-ACAD11A0A0J9YXS1 232 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 M0QZ92 97 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 CD3EAPO15446 510 aaKnown RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 SORBS3O60504 671 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 SLC16A2P36021 539 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 SPDYE7PQ495Y7 208 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 CERKLQ49MI3 558 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 BHLHB9Q6PI77 547 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 GPD1LQ8N335 351 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 FAM120BQ96EK7 910 aaKnown RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 FAXDC2Q96IV6 333 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 SMAD5Q99717 465 aaKnown RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 CUEDC1Q9NWM3 386 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 PCDHB2Q9Y5E7 798 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 PSMD12O00232 456 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 TRIM38O00635 465 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 KCNQ3O43525 872 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 CCNT2O60583 730 aaKnown RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 EDF1O60869 148 aaKnown RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 ACAT1P24752 427 aaKnown RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 PSMA3P25788 255 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 DYNLL1P63167 89 aaKnown RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 BMPR2Q13873 1038 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 N4BP2L1Q5TBK1 243 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 NIPAL1Q6NVV3 410 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 FAM180AQ6UWF9 173 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 HIPK1Q86Z02 1210 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 EPHX4Q8IUS5 362 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 FAM9CQ8IZT9 166 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 OR6B3Q8NGW1 331 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 FAM172AQ8WUF8 416 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 PTCD3Q96EY7 689 aaKnown RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 CCNB1IP1Q9NPC3 277 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 ARHGEF33A8MVX0 844 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 IRF6O14896 467 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 GUCY1A2P33402 732 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 ZIK1Q3SY52 487 aaPredicted RBP12.12□□□□□ -0.47
POLR1B-216ENST00000537335 CACHD1Q5VU97 1274 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 HELQQ8TDG4 1101 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 MYLPFQ96A32 169 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 HGH1Q9BTY7 390 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 TOR3AQ9H497 397 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 RMND5AQ9H871 391 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 CAB39LQ9H9S4 337 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 ERAP1Q9NZ08 941 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 POGZQ7Z3K3 1410 aa12.12□□□□□ -0.47
POLR1B-216ENST00000537335 SLC16A4O15374 487 aa12.11□□□□□ -0.47
POLR1B-216ENST00000537335 ASS1P00966 412 aaKnown RBP12.11□□□□□ -0.47
POLR1B-216ENST00000537335 PGK2P07205 417 aa12.11□□□□□ -0.47
POLR1B-216ENST00000537335 COX4I1P13073 169 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms