RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	DGKK	Q5KSL6	1271 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	TPGS1	Q6ZTW0	290 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	FAM71A	Q8IYT1	594 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	ARHGAP18	Q8N392	663 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	KIAA1958	Q8N8K9	716 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	HSFY1	Q96LI6	401 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	ZDHHC4	Q9NPG8	344 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	SPHK2	Q9NRA0	654 aa		11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	LIMA1	Q9UHB6	759 aa	Known RBP	11.35	□□□□□ -0.59
LDHA-215	ENST00000537296	MYO18A	Q92614	2054 aa	Known RBP	11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	CFAP54	Q96N23	3096 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296		K7EQS6	105 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296		K7ESF4	209 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	PAPSS1	O43252	624 aa	Predicted RBP	11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	MED7	O43513	233 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	ADH1C	P00326	375 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	CORO1A	P31146	461 aa	Known RBP	11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	MRE11	P49959	708 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	SEC13	P55735	322 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	NR1H3	Q13133	447 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	PDCL	Q13371	301 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	TAF5	Q15542	800 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	KLHL40	Q2TBA0	621 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	ANO4	Q32M45	955 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	ASCL5	Q7RTU5	278 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	DENND1C	Q8IV53	801 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	FMNL3	Q8IVF7	1028 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	ETFBKMT	Q8IXQ9	262 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	SCML4	Q8N228	414 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	PHTF2	Q8N3S3	785 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	SPEM1	Q8N4L4	309 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	FAM81B	Q96LP2	452 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	CPXM1	Q96SM3	734 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	SLC4A5	Q9BY07	1137 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	PLK2	Q9NYY3	685 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	LSM7	Q9UK45	103 aa	Known RBP	11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	FBXO4	Q9UKT5	387 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	AGO1	Q9UL18	857 aa	Known RBP	11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	SIK3	Q9Y2K2	1263 aa		11.34	□□□□□ -0.59
LDHA-215	ENST00000537296	LGALS16	A8MUM7	142 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	NEDD8-MDP1	E9PL57	170 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296		F8VZ95	297 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	HOXC11	O43248	304 aa	Predicted RBP	11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	TULP3	O75386	442 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	LTF	P02788	710 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	DRD1	P21728	446 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	CXCL12	P48061	93 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	AMPD2	Q01433	879 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	GAD2	Q05329	585 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	PTK2	Q05397	1052 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	GOLGA8F	Q08AF8	430 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	GOLGA8DP	Q0D2H9	430 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	SYCP1	Q15431	976 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	EMC10	Q5UCC4	262 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	SYPL2	Q5VXT5	272 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	TADA2B	Q86TJ2	420 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	C1orf131	Q8NDD1	294 aa	Known RBP	11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	RPLP0P6	Q8NHW5	317 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	ADAM32	Q8TC27	787 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	IRGQ	Q8WZA9	623 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	OTUB2	Q96DC9	234 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	IRF2BPL	Q9H1B7	796 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	NLRC4	Q9NPP4	1024 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	ABCC13	Q9NSE7	274 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	PCDHGC3	Q9UN70	934 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	NAALADL1	Q9UQQ1	740 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	PIEZO1	Q92508	2521 aa		11.33	□□□□□ -0.6
LDHA-215	ENST00000537296	PROB1	E7EW31	1015 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	KAT7	O95251	611 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	ERBB2	P04626	1255 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	TYR	P14679	529 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	CYP11B1	P15538	503 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	CDK11B	P21127	795 aa	Known RBP	11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	PXN	P49023	591 aa	Predicted RBP	11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	CCR3	P51677	355 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	POLR2F	P61218	127 aa	Known RBP	11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	PITX1	P78337	314 aa	Predicted RBP	11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	COG7	P83436	770 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	SRSF5	Q13243	272 aa	Known RBP	11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	TRIP4	Q15650	581 aa	Predicted RBP	11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	MEA1	Q16626	185 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	C2orf27A	Q580R0	203 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	TAF3	Q5VWG9	929 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	HEATR6	Q6AI08	1181 aa	Known RBP	11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	MSANTD2	Q6P1R3	559 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	TOGARAM2	Q6ZUX3	1019 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	TMEM110	Q86TL2	294 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	NOP9	Q86U38	636 aa	Known RBP	11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	SYNPO	Q8N3V7	929 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	STK32A	Q8WU08	396 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	RNF139	Q8WU17	664 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	DDX1	Q92499	740 aa	Known RBP	11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	NELL1	Q92832	810 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	CDK5RAP1	Q96SZ6	601 aa	Known RBP	11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	PNKP	Q96T60	521 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	BBS2	Q9BXC9	721 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	HCN2	Q9UL51	889 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	STRIP2	Q9ULQ0	834 aa		11.32	□□□□□ -0.6
LDHA-215	ENST00000537296	LRRC10B	A6NIK2	292 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms