RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 MANEAQ5SRI9 462 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 P3H2Q8IVL5 708 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 YAF2Q8IY57 180 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 PIGKQ92643 395 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 THOC3Q96J01 351 aaKnown RBP6.06□□□□□ -1.44
CCDC7-208ENST00000537047 CTAGE1Q96RT6 745 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 SELENOOQ9BVL4 669 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 MSRB1Q9NZV6 116 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 DDX20Q9UHI6 824 aaKnown RBP6.06□□□□□ -1.44
CCDC7-208ENST00000537047 HPSEQ9Y251 543 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 PCDHB2Q9Y5E7 798 aa6.06□□□□□ -1.44
CCDC7-208ENST00000537047 HEMK1Q9Y5R4 338 aaPredicted RBP6.06□□□□□ -1.44
CCDC7-208ENST00000537047 TMEM272A0A1B0GTI8 110 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 FRS3O43559 492 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 SNX2O60749 519 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 MAP4K4O95819 1239 aaPredicted RBP6.05□□□□□ -1.44
CCDC7-208ENST00000537047 MTA1Q13330 715 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 GAB1Q13480 694 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 DNASE1L3Q13609 305 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 PRTGQ2VWP7 1150 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 LVRNQ6Q4G3 990 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 FAM57BQ71RH2 274 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 FSTL5Q8N475 847 aaPredicted RBP6.05□□□□□ -1.44
CCDC7-208ENST00000537047 MSI2Q96DH6 328 aaKnown RBP6.05□□□□□ -1.44
CCDC7-208ENST00000537047 TMEM8AQ9HCN3 771 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 TBC1D23Q9NUY8 699 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 OGDHLQ9ULD0 1010 aa6.05□□□□□ -1.44
CCDC7-208ENST00000537047 hCG_2014768A0A024R1R8 64 aa6.04□□□□□ -1.44
CCDC7-208ENST00000537047 ANKRD62A6NC57 917 aa6.04□□□□□ -1.44
CCDC7-208ENST00000537047 EPN2O95208 641 aa6.04□□□□□ -1.44
CCDC7-208ENST00000537047 CD63P08962 238 aa6.04□□□□□ -1.44
CCDC7-208ENST00000537047 CARSP49589 748 aaKnown RBP6.04□□□□□ -1.44
CCDC7-208ENST00000537047 RHDQ02161 417 aa6.04□□□□□ -1.44
CCDC7-208ENST00000537047 NUGGCQ68CJ6 796 aa6.04□□□□□ -1.44
CCDC7-208ENST00000537047 RBM44Q6ZP01 1051 aaKnown RBP6.04□□□□□ -1.44
CCDC7-208ENST00000537047 ZNF668Q96K58 619 aaPredicted RBP6.04□□□□□ -1.44
CCDC7-208ENST00000537047 ZPBPQ9BS86 351 aa6.04□□□□□ -1.44
CCDC7-208ENST00000537047 CINPQ9BW66 212 aaPredicted RBP6.04□□□□□ -1.44
CCDC7-208ENST00000537047 GATA5Q9BWX5 397 aaPredicted RBP6.04□□□□□ -1.44
CCDC7-208ENST00000537047 FAM83DQ9H4H8 585 aa6.04□□□□□ -1.44
CCDC7-208ENST00000537047 MRPL44Q9H9J2 332 aaKnown RBP6.04□□□□□ -1.44
CCDC7-208ENST00000537047 COL15A1P39059 1388 aa6.04□□□□□ -1.44
CCDC7-208ENST00000537047 SPATA31A1Q5TZJ5 1347 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 CTIFO43310 598 aaKnown RBP6.03□□□□□ -1.44
CCDC7-208ENST00000537047 TLX3O43711 291 aaPredicted RBP6.03□□□□□ -1.44
CCDC7-208ENST00000537047 WDR47O94967 919 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 MYF5P13349 255 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 RPS6KB1P23443 525 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 PBX1P40424 430 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 ANAPC15P60006 121 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 CLCA4Q14CN2 919 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 RNF220Q5VTB9 566 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 RFX8Q6ZV50 586 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 FAM156AQ8NDB6 213 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 SMCR8Q8TEV9 937 aaPredicted RBP6.03□□□□□ -1.44
CCDC7-208ENST00000537047 LRTOMTQ8WZ04 291 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 ZNF479Q96JC4 524 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 ZNF287Q9HBT7 754 aa6.03□□□□□ -1.44
CCDC7-208ENST00000537047 MOV10Q9HCE1 1003 aaKnown RBP6.03□□□□□ -1.44
CCDC7-208ENST00000537047 A0A0G2JK05 382 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 C4orf47A7E2U8 309 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 F8W8V4 182 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 UGDHO60701 494 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 T-ENOLP0DO92 83 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 IL6STP40189 918 aaPredicted RBP6.02□□□□□ -1.45
CCDC7-208ENST00000537047 VPS41P49754 854 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 EPHB1P54762 984 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 AASDHQ4L235 1098 aaPredicted RBP6.02□□□□□ -1.45
CCDC7-208ENST00000537047 KRT78Q8N1N4 520 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.02□□□□□ -1.45
CCDC7-208ENST00000537047 ZDHHC12Q96GR4 267 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 APIPQ96GX9 242 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 ABHD10Q9NUJ1 306 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 CAPN11Q9UMQ6 739 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 PCDHA12Q9UN75 941 aa6.02□□□□□ -1.45
CCDC7-208ENST00000537047 TRBV5-3A0A0A0MS03 114 aa6.01□□□□□ -1.45
CCDC7-208ENST00000537047 PRYO14603 147 aa6.01□□□□□ -1.45
CCDC7-208ENST00000537047 SLC28A2O43868 658 aa6.01□□□□□ -1.45
CCDC7-208ENST00000537047 HOXB2P14652 356 aa6.01□□□□□ -1.45
CCDC7-208ENST00000537047 PPATQ06203 517 aa6.01□□□□□ -1.45
CCDC7-208ENST00000537047 ARHGAP29Q52LW3 1261 aa6.01□□□□□ -1.45
CCDC7-208ENST00000537047 B4GALNT4Q76KP1 1039 aa6.01□□□□□ -1.45
CCDC7-208ENST00000537047 SUN3Q8TAQ9 357 aa6.01□□□□□ -1.45
CCDC7-208ENST00000537047 LRRC27Q9C0I9 530 aa6.01□□□□□ -1.45
CCDC7-208ENST00000537047 SLCO5A1Q9H2Y9 848 aa6.01□□□□□ -1.45
CCDC7-208ENST00000537047 C1orf112Q9NSG2 853 aa6.01□□□□□ -1.45
CCDC7-208ENST00000537047 PRSS44E7EML9 344 aa6□□□□□ -1.45
CCDC7-208ENST00000537047 SYF2O95926 243 aaKnown RBP6□□□□□ -1.45
CCDC7-208ENST00000537047 MT-ND5P03915 603 aa6□□□□□ -1.45
CCDC7-208ENST00000537047 RRAGBQ5VZM2 374 aa6□□□□□ -1.45
CCDC7-208ENST00000537047 CXorf57Q6NSI4 855 aaKnown RBP6□□□□□ -1.45
CCDC7-208ENST00000537047 CCDC149Q6ZUS6 474 aa6□□□□□ -1.45
CCDC7-208ENST00000537047 TMEM199Q8N511 208 aa6□□□□□ -1.45
CCDC7-208ENST00000537047 ASNSD1Q9NWL6 643 aa6□□□□□ -1.45
CCDC7-208ENST00000537047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.99□□□□□ -1.45
CCDC7-208ENST00000537047 CYSRT1A8MQ03 144 aa5.99□□□□□ -1.45
CCDC7-208ENST00000537047 LACTBL1A8MY62 500 aa5.99□□□□□ -1.45
CCDC7-208ENST00000537047 ATG13O75143 517 aa5.99□□□□□ -1.45
CCDC7-208ENST00000537047 SCGB1D2O95969 90 aa5.99□□□□□ -1.45
CCDC7-208ENST00000537047 NGFRP08138 427 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms