RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 SMAD5Q99717 465 aaKnown RBP7.41□□□□□ -1.22
CCDC60-203ENST00000536742 FDXACB1Q9BRP7 624 aaPredicted RBP7.41□□□□□ -1.22
CCDC60-203ENST00000536742 BDH2Q9BUT1 245 aa7.41□□□□□ -1.22
CCDC60-203ENST00000536742 EDEM2Q9BV94 578 aa7.41□□□□□ -1.22
CCDC60-203ENST00000536742 ACE2Q9BYF1 805 aaPredicted RBP7.41□□□□□ -1.22
CCDC60-203ENST00000536742 KRTAP4-2Q9BYR5 136 aa7.41□□□□□ -1.22
CCDC60-203ENST00000536742 SLC32A1Q9H598 525 aa7.41□□□□□ -1.22
CCDC60-203ENST00000536742 TCF7L1Q9HCS4 588 aa7.41□□□□□ -1.22
CCDC60-203ENST00000536742 VPS45Q9NRW7 570 aa7.41□□□□□ -1.22
CCDC60-203ENST00000536742 HMG20BQ9P0W2 317 aa7.41□□□□□ -1.22
CCDC60-203ENST00000536742 MRPS17Q9Y2R5 130 aaKnown RBP7.41□□□□□ -1.22
CCDC60-203ENST00000536742 DDX49Q9Y6V7 483 aaKnown RBP7.41□□□□□ -1.22
CCDC60-203ENST00000536742 SALL3Q9BXA9 1300 aa7.41□□□□□ -1.22
CCDC60-203ENST00000536742 A0A1W2PR48 441 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 SHISA7A6NL88 538 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 HAS3O00219 553 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 NRP1O14786 923 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 PHF2O75151 1096 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 SNUPNO95149 360 aaKnown RBP7.4□□□□□ -1.22
CCDC60-203ENST00000536742 EPN2O95208 641 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 LY86O95711 162 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 JUNP05412 331 aaKnown RBP7.4□□□□□ -1.22
CCDC60-203ENST00000536742 NBPF7P0C2Y1 421 aaPredicted RBP7.4□□□□□ -1.22
CCDC60-203ENST00000536742 GAAP10253 952 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 RRADP55042 308 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 RAC3P60763 192 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 KRT17Q04695 432 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 HGFACQ04756 655 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 SLC44A4Q53GD3 710 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 C15orf39Q6ZRI6 1047 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 GAREM2Q75VX8 874 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 TAS1R1Q7RTX1 841 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 GPR155Q7Z3F1 870 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 LONP2Q86WA8 852 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 TSPEARQ8WU66 669 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 GLG1Q92896 1179 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 CCDC17Q96LX7 622 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 SFXN1Q9H9B4 322 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 RNF146Q9NTX7 359 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 CYP39A1Q9NYL5 469 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 SWAP70Q9UH65 585 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 INVSQ9Y283 1065 aa7.4□□□□□ -1.22
CCDC60-203ENST00000536742 NOTCH2Q04721 2471 aa7.4□□□□□ -1.23
CCDC60-203ENST00000536742 URB1O60287 2271 aaKnown RBP7.39□□□□□ -1.23
CCDC60-203ENST00000536742 LTA4HP09960 611 aaKnown RBP7.39□□□□□ -1.23
CCDC60-203ENST00000536742 EEF2P13639 858 aaKnown RBP7.39□□□□□ -1.23
CCDC60-203ENST00000536742 ABCG1P45844 678 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 ADCY7P51828 1080 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 MGAT5Q09328 741 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 MALLQ13021 153 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 ADRM1Q16186 407 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 MUM1L1Q5H9M0 696 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 LCE5AQ5TCM9 118 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 SLFN13Q68D06 897 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 DBX2Q6ZNG2 339 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 RABGGTAQ92696 567 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 ATP6V0A1Q93050 837 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 ANKMY1Q9P2S6 941 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 DKK4Q9UBT3 224 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 MAGEL2Q9UJ55 1249 aa7.39□□□□□ -1.23
CCDC60-203ENST00000536742 IL16Q14005 1332 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 C2orf78A6NCI8 922 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 B4DLN1 442 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 N4BP1O75113 896 aaKnown RBP7.38□□□□□ -1.23
CCDC60-203ENST00000536742 CNOT4O95628 575 aaKnown RBP7.38□□□□□ -1.23
CCDC60-203ENST00000536742 GH1P01241 217 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 VSIG10L2P0DP72 767 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 IL15P40933 162 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-203ENST00000536742 KIR2DL3P43628 341 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 ALDH5A1P51649 535 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-203ENST00000536742 MRPL12P52815 198 aaKnown RBP7.38□□□□□ -1.23
CCDC60-203ENST00000536742 SLC16A1P53985 500 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 GPC5P78333 572 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 CD69Q07108 199 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 MCL1Q07820 350 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 TWISTNBQ3B726 338 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-203ENST00000536742 ZNF852Q6ZMS4 543 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 ADGRA1Q86SQ6 560 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 COLGALT1Q8NBJ5 622 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 NUP88Q99567 741 aaPredicted RBP7.38□□□□□ -1.23
CCDC60-203ENST00000536742 FTHL17Q9BXU8 183 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 KRTAP4-11Q9BYQ6 195 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 SCOCQ9UIL1 159 aa7.38□□□□□ -1.23
CCDC60-203ENST00000536742 RELNP78509 3460 aa7.37□□□□□ -1.23
CCDC60-203ENST00000536742 NRCAMQ92823 1304 aa7.37□□□□□ -1.23
CCDC60-203ENST00000536742 C17orf102A2RUQ5 167 aa7.37□□□□□ -1.23
CCDC60-203ENST00000536742 ANHXE9PGG2 379 aa7.37□□□□□ -1.23
CCDC60-203ENST00000536742 PYCARD-AS1I3L0S3 204 aa7.37□□□□□ -1.23
CCDC60-203ENST00000536742 XPOTO43592 962 aaKnown RBP7.37□□□□□ -1.23
CCDC60-203ENST00000536742 PRICKLE3O43900 615 aaPredicted RBP7.37□□□□□ -1.23
CCDC60-203ENST00000536742 HNRNPLP14866 589 aaKnown RBP eCLIP7.37□□□□□ -1.23
CCDC60-203ENST00000536742 LAG3P18627 525 aa7.37□□□□□ -1.23
CCDC60-203ENST00000536742 PPM1AP35813 382 aa7.37□□□□□ -1.23
CCDC60-203ENST00000536742 MPLP40238 635 aa7.37□□□□□ -1.23
CCDC60-203ENST00000536742 WASP42768 502 aa7.37□□□□□ -1.23
CCDC60-203ENST00000536742 CXCL12P48061 93 aa7.37□□□□□ -1.23
CCDC60-203ENST00000536742 RFX5P48382 616 aaPredicted RBP7.37□□□□□ -1.23
CCDC60-203ENST00000536742 TIMM10P62072 90 aa7.37□□□□□ -1.23
CCDC60-203ENST00000536742 DYNLL1P63167 89 aaKnown RBP7.37□□□□□ -1.23
CCDC60-203ENST00000536742 CDK17Q00537 523 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms