RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 BIRC2Q13490 618 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 DGKDQ16760 1214 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 ARHGAP17Q68EM7 881 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 NOTUMQ6P988 496 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 KCNT2Q6UVM3 1135 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 C4orf22Q6V702 233 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 UNC5AQ6ZN44 842 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 CDHR3Q6ZTQ4 885 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 MCUQ8NE86 351 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 GTF3C2Q8WUA4 911 aaPredicted RBP13.62□□□□□ -0.23
LDLR-203ENST00000535915 LRRC39Q96DD0 335 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 OSMRQ99650 979 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 ADAMTS10Q9H324 1103 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 NXF3Q9H4D5 531 aaKnown RBP13.62□□□□□ -0.23
LDLR-203ENST00000535915 CDHR5Q9HBB8 845 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 PLAC1Q9HBJ0 212 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 SAR1AQ9NR31 198 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 ZNF487B1APH4 448 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 PDHXO00330 501 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 UGT1A9O60656 530 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 AKAP5P24588 427 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 SARNPP82979 210 aaKnown RBP13.62□□□□□ -0.23
LDLR-203ENST00000535915 BMPR2Q13873 1038 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 SLC26A9Q7LBE3 791 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 ANKRD52Q8NB46 1076 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 TRIM56Q9BRZ2 755 aaKnown RBP13.62□□□□□ -0.23
LDLR-203ENST00000535915 SLC13A1Q9BZW2 595 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 UGT1A7Q9HAW7 530 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 UGT1A10Q9HAW8 530 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 UGT1A8Q9HAW9 530 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 SMYD2Q9NRG4 433 aa13.62□□□□□ -0.23
LDLR-203ENST00000535915 STRNO43815 780 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 DIAPH2O60879 1101 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 GCATO75600 419 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 WFS1O76024 890 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 RECQL4O94761 1208 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 NR2C2P49116 596 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 ZBTB16Q05516 673 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 CTC1Q2NKJ3 1217 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 DUSP28Q4G0W2 176 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 FBXO47Q5MNV8 452 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 HEATR6Q6AI08 1181 aaKnown RBP13.61□□□□□ -0.23
LDLR-203ENST00000535915 MPP5Q8N3R9 675 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 CCDC185Q8N715 623 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 CENPIQ92674 756 aaPredicted RBP13.61□□□□□ -0.23
LDLR-203ENST00000535915 CSPG4P5Q96PW8 444 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 KCTD15Q96SI1 283 aaPredicted RBP13.61□□□□□ -0.23
LDLR-203ENST00000535915 C11orf84Q9BUA3 381 aaPredicted RBP13.61□□□□□ -0.23
LDLR-203ENST00000535915 TMEM120AQ9BXJ8 343 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 CNTN3Q9P232 1028 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 KRT38O76015 456 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 HAUS5O94927 633 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 TGDSO95455 350 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 LMO2P25791 158 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 PTPN4P29074 926 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 GNL1P36915 607 aaPredicted RBP13.61□□□□□ -0.23
LDLR-203ENST00000535915 USP50Q70EL3 339 aaPredicted RBP13.61□□□□□ -0.23
LDLR-203ENST00000535915 ZNF534Q76KX8 674 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 ZNF467Q7Z7K2 595 aaPredicted RBP13.61□□□□□ -0.23
LDLR-203ENST00000535915 FAM13CQ8NE31 585 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 GSDMBQ8TAX9 411 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 RSRC1Q96IZ7 334 aaKnown RBP13.61□□□□□ -0.23
LDLR-203ENST00000535915 SIGLEC10Q96LC7 697 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 MTMR10Q9NXD2 777 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 GJD2Q9UKL4 321 aa13.61□□□□□ -0.23
LDLR-203ENST00000535915 UBQLN1Q9UMX0 589 aaKnown RBP13.61□□□□□ -0.23
LDLR-203ENST00000535915 MTO1Q9Y2Z2 717 aaKnown RBP13.61□□□□□ -0.23
LDLR-203ENST00000535915 TRAFD1O14545 582 aaPredicted RBP13.6□□□□□ -0.23
LDLR-203ENST00000535915 GPR32O75388 356 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 GSTA2P09210 222 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 CSH1P0DML2 217 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 CSH2P0DML3 217 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 TPSB2P20231 275 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 AMPD1P23109 780 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 SERPINB3P29508 390 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 GRIA1P42261 906 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 MAGEA3P43357 314 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 TPSAB1Q15661 275 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 TLDC1Q6P9B6 456 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 TRMT10BQ6PF06 316 aaKnown RBP13.6□□□□□ -0.23
LDLR-203ENST00000535915 KBTBD7Q8WVZ9 684 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 QKIQ96PU8 341 aaKnown RBP eCLIP13.6□□□□□ -0.23
LDLR-203ENST00000535915 EBNA1BP2Q99848 306 aaKnown RBP13.6□□□□□ -0.23
LDLR-203ENST00000535915 MECRQ9BV79 373 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 SNX25Q9H3E2 840 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 KCNK13Q9HB14 408 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 FBXO6Q9NRD1 293 aaPredicted RBP13.6□□□□□ -0.23
LDLR-203ENST00000535915 KLK14Q9P0G3 267 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 LNPEPQ9UIQ6 1025 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 PLLPQ9Y342 182 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 NR2E3Q9Y5X4 410 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 DNAH12Q6ZR08 3092 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 RRN3P2A6NIE6 340 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 KPNA7A9QM74 516 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 F5H423 210 aaPredicted RBP13.6□□□□□ -0.23
LDLR-203ENST00000535915 HNRNPCL1O60812 293 aaKnown RBP13.6□□□□□ -0.23
LDLR-203ENST00000535915 RFPL1O75677 317 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 DLDP09622 509 aaKnown RBP13.6□□□□□ -0.23
LDLR-203ENST00000535915 GOT1P17174 413 aa13.6□□□□□ -0.23
LDLR-203ENST00000535915 EPHX2P34913 555 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms