RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 ARHGAP9Q9BRR9 750 aa6.78□□□□□ -1.32
CDCA3-205ENST00000535871 ULBP1Q9BZM6 244 aa6.78□□□□□ -1.32
CDCA3-205ENST00000535871 SMOC2Q9H3U7 446 aa6.78□□□□□ -1.32
CDCA3-205ENST00000535871 METTL5Q9NRN9 209 aaKnown RBP6.78□□□□□ -1.32
CDCA3-205ENST00000535871 TMEM30AQ9NV96 361 aa6.78□□□□□ -1.32
CDCA3-205ENST00000535871 ZDHHC7Q9NXF8 308 aa6.78□□□□□ -1.32
CDCA3-205ENST00000535871 HCSTQ9UBK5 93 aa6.78□□□□□ -1.32
CDCA3-205ENST00000535871 FEZ2Q9UHY8 353 aaPredicted RBP6.78□□□□□ -1.32
CDCA3-205ENST00000535871 ZNF638Q14966 1978 aaKnown RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 YJEFN3A6XGL0 299 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 EFCAB8A8MWE9 144 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 E7ENQ6 273 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 PGRMC1O00264 195 aaKnown RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 CAPN9O14815 690 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 FANCGO15287 622 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 DDX3YO15523 660 aaKnown RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 PRPSAP2O60256 369 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 URI1O94763 535 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 CXCL14O95715 111 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 LATS1O95835 1130 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 FTCDO95954 541 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 ATP1A1P05023 1023 aaKnown RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 FYNP06241 537 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 CA3P07451 260 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 LCP1P13796 627 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 ZFXP17010 805 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 POU3F3P20264 500 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 DDX6P26196 483 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 WEE1P30291 646 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 CXCR3P49682 368 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 RGS7P49802 495 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 CLCN4P51793 760 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 CACNA2D1P54289 1103 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 YWHAGP61981 247 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 DPYSL2Q16555 572 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 ARL13BQ3SXY8 428 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 GLE1Q53GS7 698 aaKnown RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 TFDP3Q5H9I0 405 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 C9orf50Q5SZB4 431 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 ERMARDQ5T6L9 678 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 CC2D1AQ6P1N0 951 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 DRICH1Q6PGQ1 229 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 PRSS55Q6UWB4 352 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 TMEM184AQ6ZMB5 413 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 CREG2Q8IUH2 290 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 SIX5Q8N196 739 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 ELMOD1Q8N336 334 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 EIF1ADQ8N9N8 165 aaKnown RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 JOSD2Q8TAC2 188 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 RNF139Q8WU17 664 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 FAM149B1Q96BN6 582 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 C1orf74Q96LT6 269 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 KLHL5Q96PQ7 755 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 HAPLN3Q96S86 360 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 OCSTAMPQ9BR26 566 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 ZNF670Q9BS34 389 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 PBX4Q9BYU1 374 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 OSBPL2Q9H1P3 480 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 SLC28A3Q9HAS3 691 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 RRAGDQ9NQL2 400 aaPredicted RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 ENTPD7Q9NQZ7 604 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 DZANK1Q9NVP4 752 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 MTUS1Q9ULD2 1270 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 USP18Q9UMW8 372 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 TFR2Q9UP52 801 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 TLR6Q9Y2C9 796 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 HBS1LQ9Y450 684 aaKnown RBP6.77□□□□□ -1.33
CDCA3-205ENST00000535871 YIPF1Q9Y548 306 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 INSL5Q9Y5Q6 135 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 RAD54BQ9Y620 910 aa6.77□□□□□ -1.33
CDCA3-205ENST00000535871 RANBP2P49792 3224 aaKnown RBP6.76□□□□□ -1.33
CDCA3-205ENST00000535871 GOLGA6L10A0A0M3HER8 536 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.76□□□□□ -1.33
CDCA3-205ENST00000535871 LCHNA4D1U4 455 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 CTAGE15A4D2H0 777 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 SLC38A8A6NNN8 435 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 H0YGN5 161 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 GOLGA8SH3BPF8 625 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 KCNK3O14649 394 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 PRRG1O14668 218 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 ADAM12O43184 909 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 IRAK2O43187 625 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 TGM5O43548 720 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 ICMTO60725 284 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 XYLBO75191 536 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 TJP3O95049 919 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 OLFM2O95897 454 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 TRUB2O95900 331 aaKnown RBP6.76□□□□□ -1.33
CDCA3-205ENST00000535871 OR4Q2P0C623 313 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 USP17L7P0C7H9 530 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 CTAGE8P0CG41 777 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 NCAM1P13591 858 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 HMGA1P17096 107 aaKnown RBP6.76□□□□□ -1.33
CDCA3-205ENST00000535871 ATF6P18850 670 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 KLRC2P26717 231 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 MIPP30301 263 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 CDC25CP30307 473 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 CCR1P32246 355 aa6.76□□□□□ -1.33
CDCA3-205ENST00000535871 GTF2F1P35269 517 aaKnown RBP eCLIP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms