RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 THP07101 528 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 NAMPTP43490 491 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 IL5RAQ01344 420 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 NFYCQ13952 458 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 DSG4Q86SJ6 1040 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 ARHGEF19Q8IW93 802 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 LPCAT1Q8NF37 534 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 ATP8B4Q8TF62 1192 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 RIC8BQ9NVN3 520 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 HEY2Q9UBP5 337 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 EIF3LQ9Y262 564 aaKnown RBP12.98□□□□□ -0.33
SPG11-203ENST00000535302 CNTNAP4Q9C0A0 1308 aa12.98□□□□□ -0.33
SPG11-203ENST00000535302 FAM47E-STBD1D6RA91 191 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 KLHL2O95198 593 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 TCHHL1Q5QJ38 904 aaPredicted RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 OTUD3Q5T2D3 398 aaPredicted RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 ZNF57Q68EA5 555 aaPredicted RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 ZNF571Q7Z3V5 609 aaPredicted RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 TRMT11Q7Z4G4 463 aaKnown RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 NSL1Q96IY1 281 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 RHOBTB2Q9BYZ6 727 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 VTI1BQ9UEU0 232 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 CHKBQ9Y259 395 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 KLHL20Q9Y2M5 609 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 POLR1DQ9Y2S0 133 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 SAC3D1A6NKF1 404 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 BAIAP3O94812 1187 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 RHOCP08134 193 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 SOX6P35712 828 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 PPATQ06203 517 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 POU6F1Q14863 301 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 PTPAQ15257 358 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 NOL9Q5SY16 702 aaKnown RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 ATXN3LQ9H3M9 355 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 VTA1Q9NP79 307 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 PDZK1P1A8MUH7 402 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 CYP24A1Q07973 514 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 RXFP2Q8WXD0 754 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 CGRRF1Q99675 332 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 OSBPL6Q9BZF3 934 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 C6orf62Q9GZU0 229 aaPredicted RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 DPP10Q8N608 796 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 SGSM3Q96HU1 749 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 BLOC1S6Q9UL45 172 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 AKAP3O75969 853 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 FAM86B2P0C5J1 330 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 VDRP11473 427 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 BGNP21810 368 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 PGM5Q15124 567 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 GSTA3Q16772 222 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 EARS2Q5JPH6 523 aaKnown RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 DNAJC14Q6Y2X3 702 aaPredicted RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 ZNF333Q96JL9 665 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 KCNK16Q96T55 309 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 KIFC1Q9BW19 673 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 GBA2Q9HCG7 927 aaPredicted RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 DCDC2CA8MYV0 355 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 PSTPIP1O43586 416 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 CDH8P55286 799 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 TFDP3Q5H9I0 405 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 LINC00523Q86TU6 105 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 VPS37AQ8NEZ2 397 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 MRPS31Q92665 395 aaKnown RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 TMEM176AQ96HP8 235 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 PDGFDQ9GZP0 370 aaPredicted RBP12.97□□□□□ -0.33
SPG11-203ENST00000535302 RAD21L1Q9H4I0 556 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 SESN1Q9Y6P5 492 aa12.97□□□□□ -0.33
SPG11-203ENST00000535302 H7C4K7 107 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 VPS26AO75436 327 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 CCDC130P13994 396 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 PSMA4P25789 261 aaKnown RBP12.96□□□□□ -0.33
SPG11-203ENST00000535302 ZNF484Q5JVG2 852 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 WLSQ5T9L3 541 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 SPOCD1Q6ZMY3 1216 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 NEK10Q6ZWH5 1172 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 EXO5Q9H790 373 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 ADARB2Q9NS39 739 aaKnown RBP12.96□□□□□ -0.33
SPG11-203ENST00000535302 PLA2G6O60733 806 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 URODP06132 367 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 GHRP10912 638 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 PSMB9P28065 219 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 KRT20P35900 424 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 RPL10AP62906 217 aaKnown RBP12.96□□□□□ -0.33
SPG11-203ENST00000535302 BEX3Q00994 111 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 CSTF3Q12996 717 aaKnown RBP12.96□□□□□ -0.33
SPG11-203ENST00000535302 PTGISQ16647 500 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 RSBN1Q5VWQ0 802 aaPredicted RBP12.96□□□□□ -0.33
SPG11-203ENST00000535302 REXO1L1PQ8IX06 675 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.96□□□□□ -0.33
SPG11-203ENST00000535302 PEX1O43933 1283 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 VAC14Q08AM6 782 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 SPATA31A6Q5VVP1 1343 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 GLIS2Q9BZE0 524 aaPredicted RBP12.96□□□□□ -0.33
SPG11-203ENST00000535302 TISP43B9A030 160 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 FDFT1P37268 417 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 SKIV2L2P42285 1042 aaKnown RBP12.96□□□□□ -0.33
SPG11-203ENST00000535302 SEMA3FQ13275 785 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 LAMB3Q13751 1172 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 CACHD1Q5VU97 1274 aa12.96□□□□□ -0.33
SPG11-203ENST00000535302 R3HCC1LQ7Z5L2 792 aaKnown RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms