RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 GNA14O95837 355 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 TBX18O95935 607 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 OAS1P00973 400 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 EGFP01133 1207 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 CALCAP01258 141 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 AFPP02771 609 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 CCDC192P0DO97 292 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 GJA4P35212 333 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 NBL1P41271 181 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 MAGEA9P43362 315 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 GALK1P51570 392 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 SLC8A3P57103 927 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 SLC7A9P82251 487 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 AMPD2Q01433 879 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 SATB1Q01826 763 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 SGO2Q562F6 1265 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 HSP90AA4PQ58FG1 418 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 DGKKQ5KSL6 1271 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 C10orf120Q5SQS8 335 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 C1orf228Q6PIY5 440 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 ZC3H14Q6PJT7 736 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 TMEM270Q6UE05 265 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 TREML1Q86YW5 311 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 RGL4Q8IZJ4 473 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 MAML2Q8IZL2 1156 aaPredicted RBP9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 TTC39CQ8N584 583 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 TRIML1Q8N9V2 468 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 KAT5Q92993 513 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 MSANTD3Q96H12 275 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 P2RY13Q9BPV8 354 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 DUSP16Q9BY84 665 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 NUP62CLQ9H1M0 184 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 CHRDQ9H2X0 955 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 CLSTN2Q9H4D0 955 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 FBRSL1Q9HCM7 1045 aaKnown RBP9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 CSNK1G1Q9HCP0 422 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 HESX1Q9UBX0 185 aa9.41□□□□□ -0.9
CCDC90B-219ENST00000534753 PRR23AA6NEV1 266 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 HHLA1C9JL84 531 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 PIK3R2O00459 728 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 PES1O00541 588 aaKnown RBP9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 HMBSP08397 361 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 RARGP13631 454 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 KRT5P13647 590 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 TBXAS1P24557 533 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 USP8P40818 1118 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 MTIF2P46199 727 aaKnown RBP9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 CXCL12P48061 93 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 CCR3P51677 355 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 MLLT6P55198 1093 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 GAS6Q14393 721 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 PPP2R5DQ14738 602 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 LPAL2Q16609 132 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 FSTL4Q6MZW2 842 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 DDX42Q86XP3 938 aaKnown RBP eCLIP9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 MIB1Q86YT6 1006 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 ARHGEF19Q8IW93 802 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 NAT16Q8N8M0 369 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 OVCA2Q8WZ82 227 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 NDRG1Q92597 394 aaKnown RBP9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 EDEM1Q92611 657 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 CD101Q93033 1021 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 CNOT6LQ96LI5 555 aaKnown RBP9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 CRACR2AQ9BSW2 395 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 RBCK1Q9BYM8 510 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 INTS2Q9H0H0 1204 aaKnown RBP9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 NMUR1Q9HB89 426 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 POLR3BQ9NW08 1133 aaPredicted RBP9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 C2orf42Q9NWW7 574 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 COMMD8Q9NX08 183 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 OSER1Q9NX31 292 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 RWDD2AQ9UIY3 292 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 TSPAN16Q9UKR8 245 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 FBXO4Q9UKT5 387 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 COQ4Q9Y3A0 265 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 ANAPC1Q9H1A4 1944 aa9.4□□□□□ -0.9
CCDC90B-219ENST00000534753 MYO16Q9Y6X6 1858 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 TTLL8A6PVC2 850 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 CHURC1-FNTBB4DL54 471 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 TULP2O00295 520 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 SLC9A3R1O14745 358 aaPredicted RBP9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 AVPP01185 164 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 LMNAP02545 664 aaKnown RBP9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 CYP17A1P05093 508 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 RALAP11233 206 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 LCP1P13796 627 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 PFKLP17858 780 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 HOXC13P31276 330 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 ATP5C1P36542 298 aaKnown RBP9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 SLC6A11P48066 632 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 PXNP49023 591 aaPredicted RBP9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 FNTBP49356 437 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 RGS7P49802 495 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 TKTL1P51854 596 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 KIF11P52732 1056 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 KDSRQ06136 332 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 EFEMP1Q12805 493 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 ANO4Q32M45 955 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 TMEM196Q5HYL7 178 aa9.39□□□□□ -0.91
CCDC90B-219ENST00000534753 PKN3Q6P5Z2 889 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms