RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 PCNX2A6NKB5 2137 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 TNRC6BQ9UPQ9 1833 aaKnown RBP12.17□□□□□ -0.46
CTNND1-238ENST00000534647 GOLGA6L4A6NEF3 574 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 TRIM24O15164 1050 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 OPHN1O60890 802 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 BEST1O76090 585 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 ASS1P00966 412 aaKnown RBP12.17□□□□□ -0.46
CTNND1-238ENST00000534647 CFIP05156 583 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 CISD3P0C7P0 127 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 RDXP35241 583 aaKnown RBP12.17□□□□□ -0.46
CTNND1-238ENST00000534647 MAPK8P45983 427 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 PGFP49763 221 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 ZNF132P52740 706 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 ATXN3P54252 364 aaPredicted RBP12.17□□□□□ -0.46
CTNND1-238ENST00000534647 UBE2HP62256 183 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 GOLGA8FQ08AF8 430 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 GOLGA8DPQ0D2H9 430 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 SLC41A1Q8IVJ1 513 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 HDDC3Q8N4P3 179 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 SLC2A14Q8TDB8 520 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 IPO4Q8TEX9 1081 aaKnown RBP12.17□□□□□ -0.46
CTNND1-238ENST00000534647 HNRNPABQ99729 332 aaKnown RBP12.17□□□□□ -0.46
CTNND1-238ENST00000534647 NACA2Q9H009 215 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 BLZF1Q9H2G9 400 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 FAM124BQ9H5Z6 455 aaPredicted RBP12.17□□□□□ -0.46
CTNND1-238ENST00000534647 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.17□□□□□ -0.463e-8■■■■■ 38
CTNND1-238ENST00000534647 DNAJC17Q9NVM6 304 aaKnown RBP12.17□□□□□ -0.46
CTNND1-238ENST00000534647 NFE2L3Q9Y4A8 694 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 PCDHA5Q9Y5H7 936 aa12.17□□□□□ -0.46
CTNND1-238ENST00000534647 ZZEF1O43149 2961 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 MYOFQ9NZM1 2061 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 SRRM3A6NNA2 597 aaPredicted RBP12.16□□□□□ -0.46
CTNND1-238ENST00000534647 PRRT4C9JH25 899 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 HHLA1C9JL84 531 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 NEDD8-MDP1E9PL57 170 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 PDXKO00764 312 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 NPC1O15118 1278 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 GJB3O75712 270 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 TBX18O95935 607 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 SYPP08247 313 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 CD59P13987 128 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 TYRP14679 529 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 TRIM21P19474 475 aaKnown RBP12.16□□□□□ -0.46
CTNND1-238ENST00000534647 PLA2G4AP47712 749 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 NDST1P52848 882 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 MAP3K7CLP57077 242 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 MCCD1P59942 119 aaPredicted RBP12.16□□□□□ -0.46
CTNND1-238ENST00000534647 SIM1P81133 766 aaPredicted RBP12.16□□□□□ -0.46
CTNND1-238ENST00000534647 TAGLNQ01995 201 aaKnown RBP12.16□□□□□ -0.46
CTNND1-238ENST00000534647 INCA1Q0VD86 236 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 CUL4BQ13620 913 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 RESP18Q5W5W9 173 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 EGFLAMQ63HQ2 1017 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 Q6ZNB5 142 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 SV2AQ7L0J3 742 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 CHPFQ8IZ52 775 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 ZNF454Q8N9F8 522 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 C1orf216Q8TAB5 229 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 FOXJ1Q92949 421 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 ACOX2Q99424 681 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 BBS2Q9BXC9 721 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 KCTD10Q9H3F6 313 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 OSER1Q9NX31 292 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 FAM13BQ9NYF5 915 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 SUSD2Q9UGT4 822 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 LSM7Q9UK45 103 aaKnown RBP12.16□□□□□ -0.46
CTNND1-238ENST00000534647 SLC27A6Q9Y2P4 619 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 GON4LQ3T8J9 2241 aa12.16□□□□□ -0.46
CTNND1-238ENST00000534647 SPAARA0A1B0GVQ0 90 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 MAPK13O15264 365 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 HYAL3O43820 417 aaPredicted RBP12.15□□□□□ -0.46
CTNND1-238ENST00000534647 KLRC4O43908 158 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 CAPNS1P04632 268 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 SLFN14P0C7P3 912 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 FAM200BP0CF97 657 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 CCDC130P13994 396 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 CASP1P29466 404 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 ASPAP45381 313 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 DGKGP49619 791 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 DLG4P78352 724 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 ENPEPQ07075 957 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 STK4Q13043 487 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 ENPP2Q13822 863 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 ZNF423Q2M1K9 1284 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 SYCP2LQ5T4T6 812 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 KIAA1211LQ6NV74 962 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 CLEC20AQ6ZU45 233 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 RAB44Q7Z6P3 723 aaPredicted RBP12.15□□□□□ -0.46
CTNND1-238ENST00000534647 MINDY1Q8N5J2 469 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 C12orf29Q8N999 325 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 TRIML1Q8N9V2 468 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 MRGPRX1Q96LB2 322 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 ZDHHC5Q9C0B5 715 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 CYP3A43Q9HB55 503 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.15□□□□□ -0.46
CTNND1-238ENST00000534647 EGFL7Q9UHF1 273 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 DNMT3LQ9UJW3 386 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 PCDHA7Q9UN72 937 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 ZNF510Q9Y2H8 683 aa12.15□□□□□ -0.46
CTNND1-238ENST00000534647 MYO18AQ92614 2054 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms