RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 KLHL5Q96PQ7 755 aa10.47□□□□□ -0.73
RPS3-219ENST00000534440 PLVAPQ9BX97 442 aa10.47□□□□□ -0.73
RPS3-219ENST00000534440 EPC1Q9H2F5 836 aa10.47□□□□□ -0.73
RPS3-219ENST00000534440 CYP4F11Q9HBI6 524 aa10.47□□□□□ -0.73
RPS3-219ENST00000534440 WDR6Q9NNW5 1121 aaKnown RBP10.47□□□□□ -0.73
RPS3-219ENST00000534440 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.47□□□□□ -0.734e-15■□□□□ 8.3
RPS3-219ENST00000534440 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.47□□□□□ -0.73
RPS3-219ENST00000534440 COX16Q9P0S2 106 aa10.47□□□□□ -0.73
RPS3-219ENST00000534440 RNF14Q9UBS8 474 aa10.47□□□□□ -0.73
RPS3-219ENST00000534440 NUDT5Q9UKK9 219 aa10.47□□□□□ -0.73
RPS3-219ENST00000534440 LZTS1Q9Y250 596 aa10.47□□□□□ -0.73
RPS3-219ENST00000534440 R3HDM2Q9Y2K5 976 aaKnown RBP10.47□□□□□ -0.73
RPS3-219ENST00000534440 NCOR1O75376 2440 aa10.47□□□□□ -0.73
RPS3-219ENST00000534440 hCG_1818297A0A087WSY0 165 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 C2orf71A6NGG8 1288 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 EFCAB8A8MWE9 144 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 IRAK2O43187 625 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 MSI1O43347 362 aaKnown RBP10.46□□□□□ -0.73
RPS3-219ENST00000534440 TGM5O43548 720 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 PRPSAP2O60256 369 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 RTN3O95197 1032 aaPredicted RBP10.46□□□□□ -0.73
RPS3-219ENST00000534440 CXCL14O95715 111 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 KRT7P08729 469 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 ZDHHC11BP0C7U3 371 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 SPATA31D3P0C874 917 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 KRT10P13645 584 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 YWHAQP27348 245 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 CA8P35219 290 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 PTPN7P35236 360 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 PAFAH1B1P43034 410 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 ERVK-21P61565 698 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 CREMQ03060 361 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 ITIH3Q06033 890 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 TWF1Q12792 350 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 TAF10Q12962 218 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 MMRN1Q13201 1228 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 NME3Q13232 169 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 KLF1Q13351 362 aaPredicted RBP10.46□□□□□ -0.73
RPS3-219ENST00000534440 EIF4EBP2Q13542 120 aaPredicted RBP10.46□□□□□ -0.73
RPS3-219ENST00000534440 SKIV2LQ15477 1246 aaKnown RBP10.46□□□□□ -0.73
RPS3-219ENST00000534440 ELF2Q15723 593 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 HADHQ16836 314 aaKnown RBP10.46□□□□□ -0.73
RPS3-219ENST00000534440 LONRF2Q1L5Z9 754 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 ERCC6LQ2NKX8 1250 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 SCYL2Q6P3W7 929 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 LILRA6Q6PI73 481 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 SPATA31D4Q6ZUB0 917 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 BEND5Q7L4P6 421 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 CCDC50Q8IVM0 306 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 PRELID2Q8N945 189 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 CMASQ8NFW8 434 aaPredicted RBP10.46□□□□□ -0.73
RPS3-219ENST00000534440 TEKT4Q8WW24 435 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 GOLGA1Q92805 767 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 CASP10Q92851 521 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 HLA-CQ95604 372 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 FBXO32Q969P5 355 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 PGAP3Q96FM1 320 aaPredicted RBP10.46□□□□□ -0.73
RPS3-219ENST00000534440 RBM41Q96IZ5 413 aaKnown RBP10.46□□□□□ -0.73
RPS3-219ENST00000534440 KCTD15Q96SI1 283 aaPredicted RBP10.46□□□□□ -0.73
RPS3-219ENST00000534440 LRFN3Q9BTN0 628 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 HEMGNQ9BXL5 484 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 SMOC2Q9H3U7 446 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 FBXO44Q9H4M3 255 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 FAM204AQ9H8W3 233 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 PCDH18Q9HCL0 1135 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 CD320Q9NPF0 282 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 ENTPD7Q9NQZ7 604 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 TLR9Q9NR96 1032 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 DDIT4Q9NX09 232 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 DDX56Q9NY93 547 aaKnown RBP10.46□□□□□ -0.73
RPS3-219ENST00000534440 HSFX1Q9UBD0 423 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 STK39Q9UEW8 545 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 FBXW11Q9UKB1 542 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 STAP1Q9ULZ2 295 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.46□□□□□ -0.73
RPS3-219ENST00000534440 RWDD3Q9Y3V2 267 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 INSL5Q9Y5Q6 135 aa10.46□□□□□ -0.73
RPS3-219ENST00000534440 OBSL1O75147 1896 aa10.46□□□□□ -0.74
RPS3-219ENST00000534440 KRIT1O00522 736 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 NRG2O14511 850 aaPredicted RBP10.45□□□□□ -0.74
RPS3-219ENST00000534440 CAPN9O14815 690 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 MDM4O15151 490 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 ZRANB2O95218 330 aaKnown RBP eCLIP10.45□□□□□ -0.74
RPS3-219ENST00000534440 KDELR1P24390 212 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 TUFMP49411 452 aaKnown RBP10.45□□□□□ -0.74
RPS3-219ENST00000534440 TERF1P54274 439 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 DEUP1Q05D60 604 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 PLD1Q13393 1074 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 DPYSL3Q14195 570 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 SMC1AQ14683 1233 aaKnown RBP10.45□□□□□ -0.74
RPS3-219ENST00000534440 PPP2R5EQ16537 467 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 MSANTD2Q6P1R3 559 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 MON1AQ86VX9 555 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 TCEAL8Q8IYN2 117 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 RCOR2Q8IZ40 523 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 PYROXD2Q8N2H3 581 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 MMGT1Q8N4V1 131 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 MRPL43Q8N983 215 aaKnown RBP10.45□□□□□ -0.74
RPS3-219ENST00000534440 FAM71BQ8TC56 605 aa10.45□□□□□ -0.74
RPS3-219ENST00000534440 ATG4AQ8WYN0 398 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms