RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 MIS12Q9H081 205 aa22.32■■□□□ 1.16
PKP3-211ENST00000534401 ST7Q9NRC1 585 aa22.32■■□□□ 1.16
PKP3-211ENST00000534401 FAM207AQ9NSI2 230 aaPredicted RBP22.32■■□□□ 1.16
PKP3-211ENST00000534401 FBXO10Q9UK96 956 aa22.32■■□□□ 1.16
PKP3-211ENST00000534401 SLC12A8A0AV02 714 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 CAVIN2O95810 425 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 GLI1P08151 1106 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 HOXA6P31267 233 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 KRT9P35527 623 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 SLC6A11P48066 632 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 CCR3P51677 355 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 POLR2FP61218 127 aaKnown RBP22.31■■□□□ 1.16
PKP3-211ENST00000534401 RING1Q06587 406 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 MESP2Q0VG99 397 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 EIF4EBP2Q13542 120 aaPredicted RBP22.31■■□□□ 1.16
PKP3-211ENST00000534401 C12orf40Q86WS4 652 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 CPXM2Q8N436 756 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 EPS8L1Q8TE68 723 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 ATOH1Q92858 354 aaPredicted RBP22.31■■□□□ 1.16
PKP3-211ENST00000534401 P2RY11Q96G91 374 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 PPP1R13BQ96KQ4 1090 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 ASNSD1Q9NWL6 643 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 TJP2Q9UDY2 1190 aa22.31■■□□□ 1.16
PKP3-211ENST00000534401 NOCTQ9UK39 431 aaKnown RBP22.31■■□□□ 1.16
PKP3-211ENST00000534401 AGO1Q9UL18 857 aaKnown RBP22.31■■□□□ 1.16
PKP3-211ENST00000534401 K7EQS6 105 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 TEX33O43247 280 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 LATS1O95835 1130 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 CORO1AP31146 461 aaKnown RBP22.3■■□□□ 1.16
PKP3-211ENST00000534401 SOX5P35711 763 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 GABRB2P47870 512 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 NNTQ13423 1086 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 ZSCAN23Q3MJ62 389 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 NOP9Q86U38 636 aaKnown RBP22.3■■□□□ 1.16
PKP3-211ENST00000534401 ZNF677Q86XU0 584 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 PNKPQ96T60 521 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 PHOX2BQ99453 314 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 FAM126AQ9BYI3 521 aaPredicted RBP22.3■■□□□ 1.16
PKP3-211ENST00000534401 CBX8Q9HC52 389 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 C2orf42Q9NWW7 574 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 WDR35Q9P2L0 1181 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 SFMBT1Q9UHJ3 866 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 VPS13AQ96RL7 3174 aa22.3■■□□□ 1.16
PKP3-211ENST00000534401 A0A1B0GTH6 734 aa22.29■■□□□ 1.16
PKP3-211ENST00000534401 K7ESF4 209 aa22.29■■□□□ 1.16
PKP3-211ENST00000534401 CACNG3O60359 315 aa22.29■■□□□ 1.16
PKP3-211ENST00000534401 PENKP01210 267 aaPredicted RBP22.29■■□□□ 1.16
PKP3-211ENST00000534401 IGLV3-25P01717 112 aa22.29■■□□□ 1.16
PKP3-211ENST00000534401 CHKAP35790 457 aa22.29■■□□□ 1.16
PKP3-211ENST00000534401 CXCL12P48061 93 aa22.29■■□□□ 1.16
PKP3-211ENST00000534401 PKN3Q6P5Z2 889 aa22.29■■□□□ 1.16
PKP3-211ENST00000534401 ZBTB44Q8NCP5 570 aa22.29■■□□□ 1.16
PKP3-211ENST00000534401 C1orf131Q8NDD1 294 aaKnown RBP22.29■■□□□ 1.16
PKP3-211ENST00000534401 AZIN2Q96A70 460 aa22.29■■□□□ 1.16
PKP3-211ENST00000534401 SLC39A13Q96H72 371 aa22.29■■□□□ 1.16
PKP3-211ENST00000534401 PIWIL1Q96J94 861 aaKnown RBP22.29■■□□□ 1.16
PKP3-211ENST00000534401 TRIM62Q9BVG3 475 aa22.29■■□□□ 1.16
PKP3-211ENST00000534401 RIF1Q5UIP0 2472 aaKnown RBP22.29■■□□□ 1.16
PKP3-211ENST00000534401 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.28■■□□□ 1.16
PKP3-211ENST00000534401 TULP3O75386 442 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 LSM8O95777 96 aaKnown RBP22.28■■□□□ 1.16
PKP3-211ENST00000534401 YWHAZP63104 245 aaKnown RBP22.28■■□□□ 1.16
PKP3-211ENST00000534401 SATB1Q01826 763 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 PTPN20Q4JDL3 420 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 SYPL2Q5VXT5 272 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 PASD1Q8IV76 773 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 TMEM35BQ8NCS4 154 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 ZNF397Q8NF99 534 aaPredicted RBP22.28■■□□□ 1.16
PKP3-211ENST00000534401 NEK11Q8NG66 645 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 CCDC26Q8TAB7 109 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 DQX1Q8TE96 717 aaKnown RBP22.28■■□□□ 1.16
PKP3-211ENST00000534401 GOLGA1Q92805 767 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 NOX5Q96PH1 765 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 SLC2A13Q96QE2 648 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 IRX2Q9BZI1 471 aaPredicted RBP22.28■■□□□ 1.16
PKP3-211ENST00000534401 POPDC2Q9HBU9 364 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 NLRC4Q9NPP4 1024 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 FAM86C1Q9NVL1 165 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 NAALADL1Q9UQQ1 740 aa22.28■■□□□ 1.16
PKP3-211ENST00000534401 ZFHX2Q9C0A1 2572 aaPredicted RBP22.28■■□□□ 1.16
PKP3-211ENST00000534401 A0A1W2PQC6 194 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 LILRB5O75023 590 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 ATG13O75143 517 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 RNF40O75150 1001 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 HMBSP08397 361 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 CISD3P0C7P0 127 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 CHRNB2P17787 502 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 SCNN1AP37088 669 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 STAT1P42224 750 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 GRIA2P42262 883 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 TNFRSF4P43489 277 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 CSTF1Q05048 431 aaKnown RBP22.27■■□□□ 1.16
PKP3-211ENST00000534401 FYB2Q5VWT5 728 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 RNF43Q68DV7 783 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 OLFML1Q6UWY5 402 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 DENND1CQ8IV53 801 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 USP33Q8TEY7 942 aa22.27■■□□□ 1.16
PKP3-211ENST00000534401 NAP1L5Q96NT1 182 aaPredicted RBP22.27■■□□□ 1.16
PKP3-211ENST00000534401 MSI1O43347 362 aaKnown RBP22.26■■□□□ 1.15
PKP3-211ENST00000534401 GFPT2O94808 682 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms