RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PLEKHA4Q9H4M7 779 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 RNF41Q9H4P4 317 aaPredicted RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 BRD9Q9H8M2 597 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MINDY3Q9H8M7 445 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 CD248Q9HCU0 757 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 ZNF334Q9HCZ1 680 aaPredicted RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 VPS45Q9NRW7 570 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 ZDHHC7Q9NXF8 308 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 SNTG2Q9NY99 539 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 DTLQ9NZJ0 730 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 GABBR1Q9UBS5 961 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 PIN4Q9Y237 131 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MRPS17Q9Y2R5 130 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 EMC9Q9Y3B6 208 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MYH8P13535 1937 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 DOCK8Q8NF50 2099 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 APC2O95996 2303 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 NOTCH2Q04721 2471 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 TEP1Q99973 2627 aaKnown RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 UBR5O95071 2799 aaPredicted RBP3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 MGAQ8IWI9 3026 aa3.32□□□□□ -1.88
CHMP4A-208ENST00000534106 FANCMQ8IYD8 2048 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 LNP1A1A4G5 178 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 ARL5CA6NH57 179 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 SLC38A8A6NNN8 435 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 FAM86B1E9PN63 330 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 IFIT3O14879 490 aaKnown RBP3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 MAFGO15525 162 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 MOSPD3O75425 235 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 STBD1O95210 358 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 RHOP08100 348 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 FAM86B2P0C5J1 330 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 SRGAP2CP0DJJ0 459 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 CCDC192P0DO97 292 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 CEACAM1P13688 526 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 AKAP5P24588 427 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 U2AF2P26368 475 aaKnown RBP eCLIP3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 KIF5BP33176 963 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 ECI1P42126 302 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 RACK1P63244 317 aaKnown RBP3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 NFATC3Q12968 1075 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 KLF10Q13118 480 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 PON2Q15165 354 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 USP41Q3LFD5 358 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 PLK5Q496M5 336 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 PABPC1LQ4VXU2 614 aaKnown RBP3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 CEP55Q53EZ4 464 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 CCDC178Q5BJE1 867 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 DAB2IPQ5VWQ8 1189 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 FAM160B1Q5W0V3 765 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 STEAP3Q658P3 488 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 NAIF1Q69YI7 327 aaPredicted RBP3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 MIS18BP1Q6P0N0 1132 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 VITQ6UXI7 678 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 CATSPER4Q7RTX7 472 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 CDR2LQ86X02 465 aaPredicted RBP3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 KLHL36Q8N4N3 616 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 FRMD1Q8N878 549 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 GSTCDQ8NEC7 633 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 OR2I1PQ8NGU4 316 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 URGCPQ8TCY9 931 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 HDAC7Q8WUI4 952 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 GAB3Q8WWW8 586 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 TNPO1Q92973 898 aaKnown RBP3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 EVI5LQ96CN4 794 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 CDHR1Q96JP9 859 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 MBOAT7Q96N66 472 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 CAMK1GQ96NX5 476 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 TMEM209Q96SK2 561 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 MAP7D2Q96T17 732 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 TMEM175Q9BSA9 504 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 UBAC1Q9BSL1 405 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 GCOM2Q9BZD3 368 aaPredicted RBP3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 CSRNP2Q9H175 543 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 IL25Q9H293 177 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 RSAD1Q9HA92 442 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 FBRSL1Q9HCM7 1045 aaKnown RBP3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 DACT1Q9NYF0 836 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 GTSE1Q9NYZ3 720 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 SUCLA2Q9P2R7 463 aaPredicted RBP3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 FBXW11Q9UKB1 542 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 NEUROG3Q9Y4Z2 214 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 PCDHB4Q9Y5E5 795 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 RAI2Q9Y5P3 530 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 ZFP37Q9Y6Q3 630 aaPredicted RBP3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 DOCK6Q96HP0 2047 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 KIAA1217Q5T5P2 1943 aa3.31□□□□□ -1.88
CHMP4A-208ENST00000534106 FNDC1Q4ZHG4 1894 aaPredicted RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 URB1O60287 2271 aaKnown RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 NFASCO94856 1347 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 TTC41PQ6P2S7 1318 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 ATMQ13315 3056 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 BAZ2BQ9UIF8 2168 aaKnown RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 DNHD1Q96M86 4753 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 BCLAF3A2AJT9 711 aaKnown RBP3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 WDR27A2RRH5 827 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 FAM221BA6H8Z2 402 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 CASTOR2A6NHX0 329 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 I3L4J1 428 aa3.3□□□□□ -1.88
CHMP4A-208ENST00000534106 ARNTLO00327 626 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms